ID A7ZDH1_CAMC1 Unreviewed; 417 AA.
AC A7ZDH1;
DT 23-OCT-2007, integrated into UniProtKB/TrEMBL.
DT 23-OCT-2007, sequence version 1.
DT 27-MAR-2024, entry version 89.
DE SubName: Full=RNA polymerase sigma54 factor {ECO:0000313|EMBL:EAT98617.1};
DE EC=2.7.7.6 {ECO:0000313|EMBL:EAT98617.1};
GN Name=rpoN {ECO:0000313|EMBL:EAT98617.1};
GN ORFNames=CCC13826_1240 {ECO:0000313|EMBL:EAT98617.1};
OS Campylobacter concisus (strain 13826).
OC Bacteria; Campylobacterota; Epsilonproteobacteria; Campylobacterales;
OC Campylobacteraceae; Campylobacter.
OX NCBI_TaxID=360104 {ECO:0000313|EMBL:EAT98617.1, ECO:0000313|Proteomes:UP000001121};
RN [1] {ECO:0000313|Proteomes:UP000001121}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=13826 {ECO:0000313|Proteomes:UP000001121};
RA Fouts D.E., Mongodin E.F., Puiu D., Sebastian Y., Miller W.G.,
RA Mandrell R.E., On S., Nelson K.E.;
RT "Genome sequence of Campylobacter concisus 13826 isolated from human
RT feces.";
RL Submitted (OCT-2007) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the sigma-54 factor family.
CC {ECO:0000256|ARBA:ARBA00008798}.
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DR EMBL; CP000792; EAT98617.1; -; Genomic_DNA.
DR AlphaFoldDB; A7ZDH1; -.
DR STRING; 360104.CCC13826_1240; -.
DR KEGG; cco:CCC13826_1240; -.
DR eggNOG; COG1508; Bacteria.
DR HOGENOM; CLU_020569_1_0_7; -.
DR OrthoDB; 9814402at2; -.
DR Proteomes; UP000001121; Chromosome.
DR GO; GO:0000428; C:DNA-directed RNA polymerase complex; IEA:UniProtKB-KW.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0001216; F:DNA-binding transcription activator activity; IEA:InterPro.
DR GO; GO:0016779; F:nucleotidyltransferase activity; IEA:UniProtKB-KW.
DR GO; GO:0016987; F:sigma factor activity; IEA:UniProtKB-KW.
DR GO; GO:0006352; P:DNA-templated transcription initiation; IEA:InterPro.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR Gene3D; 1.10.10.1330; RNA polymerase sigma-54 factor, core-binding domain; 1.
DR InterPro; IPR000394; RNA_pol_sigma_54.
DR InterPro; IPR007046; RNA_pol_sigma_54_core-bd.
DR InterPro; IPR007634; RNA_pol_sigma_54_DNA-bd.
DR InterPro; IPR038709; RpoN_core-bd_sf.
DR NCBIfam; TIGR02395; rpoN_sigma; 1.
DR PANTHER; PTHR32248; RNA POLYMERASE SIGMA-54 FACTOR; 1.
DR PANTHER; PTHR32248:SF4; RNA POLYMERASE SIGMA-54 FACTOR; 1.
DR Pfam; PF00309; Sigma54_AID; 1.
DR Pfam; PF04963; Sigma54_CBD; 1.
DR Pfam; PF04552; Sigma54_DBD; 1.
DR PIRSF; PIRSF000774; RpoN; 1.
DR PRINTS; PR00045; SIGMA54FCT.
DR PROSITE; PS00718; SIGMA54_2; 1.
DR PROSITE; PS50044; SIGMA54_3; 1.
PE 3: Inferred from homology;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW DNA-directed RNA polymerase {ECO:0000256|ARBA:ARBA00022478};
KW Nucleotidyltransferase {ECO:0000256|ARBA:ARBA00022695,
KW ECO:0000313|EMBL:EAT98617.1}; Sigma factor {ECO:0000256|ARBA:ARBA00023082};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015};
KW Transferase {ECO:0000256|ARBA:ARBA00022679, ECO:0000313|EMBL:EAT98617.1}.
FT DOMAIN 76..250
FT /note="RNA polymerase sigma factor 54 core-binding"
FT /evidence="ECO:0000259|Pfam:PF04963"
FT DOMAIN 259..411
FT /note="RNA polymerase sigma factor 54 DNA-binding"
FT /evidence="ECO:0000259|Pfam:PF04552"
SQ SEQUENCE 417 AA; 48038 MW; D97DD960483F18CE CRC64;
MMLRQKQTLA PKIKLNQTLR SWLPILQSGL DELKETLEPF IKENPFATIE HKNLEKSEKR
RNFFEQVSRN SVSESIEALS IYKESLYEKL VSQINPPLFP TQKSQDIAYK IIECLDDEGY
FSYDDEIFAG FSESEVERVR ARFAYLEPCG VGAKDLKESF LFQLSEVEAS EEIIECAKKI
ILNFENIEKL RKLKFYDDAL KIIKKFKNPP AIEYLEDEKE AVPDIFVLST SSGISVQIND
DYYPEISIDT EGLDEKEAFV SSRIKEASEL IDALEMRKAT LYKIGLMIVE YQYDYFLGGD
IKPMKLKDLA DELGRNPSTI SRAIANKYLS SPRGTVALKN FFATGFDEET SNAAIKEFLL
ELIKNEDHKK PLSDLKIQEL IQAKFNIQIV RRTITKYRKI LNIGSSSQRK KIYQING
//
