ID A8B4P7_GIAIC Unreviewed; 126 AA.
AC A8B4P7;
DT 13-NOV-2007, integrated into UniProtKB/TrEMBL.
DT 13-NOV-2007, sequence version 1.
DT 24-JAN-2024, entry version 59.
DE SubName: Full=U6 snRNA-associated Sm-like protein LSm3 {ECO:0000313|EMBL:EDO81984.1, ECO:0000313|EMBL:KAE8303733.1};
GN ORFNames=GL50803_0022112 {ECO:0000313|EMBL:KAE8303733.1},
GN GL50803_22112 {ECO:0000313|EMBL:EDO81984.1};
OS Giardia intestinalis (strain ATCC 50803 / WB clone C6) (Giardia lamblia).
OC Eukaryota; Metamonada; Diplomonadida; Hexamitidae; Giardiinae; Giardia.
OX NCBI_TaxID=184922 {ECO:0000313|EMBL:EDO81984.1};
RN [1] {ECO:0000313|EMBL:EDO81984.1, ECO:0000313|Proteomes:UP000001548}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 50803 / WB clone C6 {ECO:0000313|Proteomes:UP000001548},
RC and WB C6 {ECO:0000313|EMBL:EDO81984.1};
RX PubMed=17901334; DOI=10.1126/science.1143837;
RA Morrison H.G., McArthur A.G., Gillin F.D., Aley S.B., Adam R.D.,
RA Olsen G.J., Best A.A., Cande W.Z., Chen F., Cipriano M.J., Davids B.J.,
RA Dawson S.C., Elmendorf H.G., Hehl A.B., Holder M.E., Huse S.M., Kim U.U.,
RA Lasek-Nesselquist E., Manning G., Nigam A., Nixon J.E., Palm D.,
RA Passamaneck N.E., Prabhu A., Reich C.I., Reiner D.S., Samuelson J.,
RA Svard S.G., Sogin M.L.;
RT "Genomic minimalism in the early diverging intestinal parasite Giardia
RT lamblia.";
RL Science 317:1921-1926(2007).
RN [2] {ECO:0000313|EMBL:KAE8303733.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=WB C6 {ECO:0000313|EMBL:KAE8303733.1};
RA Xu F., Jex A., Svard S.G.;
RT "New Giardia intestinalis WB genome in near-complete chromosomes.";
RL Submitted (JUL-2019) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EDO81984.1}.
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DR EMBL; AACB02000002; EDO81984.1; -; Genomic_DNA.
DR EMBL; AACB03000002; KAE8303733.1; -; Genomic_DNA.
DR RefSeq; XP_001709658.1; XM_001709606.1.
DR AlphaFoldDB; A8B4P7; -.
DR STRING; 184922.A8B4P7; -.
DR EnsemblProtists; EDO81984; EDO81984; GL50803_22112.
DR GeneID; 5702582; -.
DR KEGG; gla:GL50803_0022112; -.
DR VEuPathDB; GiardiaDB:GL50803_22112; -.
DR HOGENOM; CLU_1985814_0_0_1; -.
DR OMA; ASFDEHM; -.
DR Proteomes; UP000001548; Chromosome 4.
DR GO; GO:0071013; C:catalytic step 2 spliceosome; IBA:GO_Central.
DR GO; GO:1990726; C:Lsm1-7-Pat1 complex; IBA:GO_Central.
DR GO; GO:0000932; C:P-body; IBA:GO_Central.
DR GO; GO:0071011; C:precatalytic spliceosome; IBA:GO_Central.
DR GO; GO:0046540; C:U4/U6 x U5 tri-snRNP complex; IBA:GO_Central.
DR GO; GO:0005688; C:U6 snRNP; IBA:GO_Central.
DR GO; GO:0003723; F:RNA binding; IBA:GO_Central.
DR GO; GO:0000398; P:mRNA splicing, via spliceosome; IBA:GO_Central.
DR GO; GO:0033962; P:P-body assembly; IBA:GO_Central.
DR Gene3D; 2.30.30.100; -; 1.
DR InterPro; IPR010920; LSM_dom_sf.
DR InterPro; IPR047575; Sm.
DR InterPro; IPR040002; Sm-like_LSM3.
DR InterPro; IPR001163; Sm_dom_euk/arc.
DR PANTHER; PTHR13110; U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM3; 1.
DR PANTHER; PTHR13110:SF0; U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM3; 1.
DR Pfam; PF01423; LSM; 1.
DR SMART; SM00651; Sm; 1.
DR SUPFAM; SSF50182; Sm-like ribonucleoproteins; 1.
DR PROSITE; PS52002; SM; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000001548}.
FT DOMAIN 52..123
FT /note="Sm"
FT /evidence="ECO:0000259|PROSITE:PS52002"
SQ SEQUENCE 126 AA; 14073 MW; C012F009BA554DD3 CRC64;
MSGASLTYLQ SEGAGRKTGM DVDHSNEEYM EAPLFHGSAG DRVTPEYTEF SNPLYLLKTS
LEDRVSVLLQ NNSSITGLLA SFDEHMNLIL INAEETGHSL NRFFPLLVIR GDSIIFVTRR
RFTSIT
//
