ID A8FQD1_SHESH Unreviewed; 870 AA.
AC A8FQD1;
DT 13-NOV-2007, integrated into UniProtKB/TrEMBL.
DT 13-NOV-2007, sequence version 1.
DT 27-MAR-2024, entry version 82.
DE SubName: Full=Sensory box protein {ECO:0000313|EMBL:ABV35054.1};
DE Flags: Precursor;
GN OrderedLocusNames=Ssed_0441 {ECO:0000313|EMBL:ABV35054.1};
OS Shewanella sediminis (strain HAW-EB3).
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Alteromonadales;
OC Shewanellaceae; Shewanella.
OX NCBI_TaxID=425104 {ECO:0000313|EMBL:ABV35054.1, ECO:0000313|Proteomes:UP000002015};
RN [1] {ECO:0000313|EMBL:ABV35054.1, ECO:0000313|Proteomes:UP000002015}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=HAW-EB3 {ECO:0000313|EMBL:ABV35054.1,
RC ECO:0000313|Proteomes:UP000002015};
RG US DOE Joint Genome Institute;
RA Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E.,
RA Tice H., Pitluck S., Chertkov O., Brettin T., Bruce D., Detter J.C.,
RA Han C., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Kim E.,
RA Zhao J.-S., Richardson P.;
RT "Complete sequence of Shewanella sediminis HAW-EB3.";
RL Submitted (AUG-2007) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CP000821; ABV35054.1; -; Genomic_DNA.
DR RefSeq; WP_012140791.1; NC_009831.1.
DR AlphaFoldDB; A8FQD1; -.
DR STRING; 425104.Ssed_0441; -.
DR KEGG; sse:Ssed_0441; -.
DR eggNOG; COG5001; Bacteria.
DR eggNOG; COG5002; Bacteria.
DR HOGENOM; CLU_000445_79_0_6; -.
DR OrthoDB; 9816034at2; -.
DR Proteomes; UP000002015; Chromosome.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR CDD; cd01948; EAL; 1.
DR CDD; cd01949; GGDEF; 1.
DR CDD; cd00130; PAS; 1.
DR Gene3D; 3.30.70.270; -; 1.
DR Gene3D; 3.20.20.450; EAL domain; 1.
DR Gene3D; 3.30.450.20; PAS domain; 1.
DR InterPro; IPR001633; EAL_dom.
DR InterPro; IPR035919; EAL_sf.
DR InterPro; IPR000160; GGDEF_dom.
DR InterPro; IPR029787; Nucleotide_cyclase.
DR InterPro; IPR000014; PAS.
DR InterPro; IPR035965; PAS-like_dom_sf.
DR InterPro; IPR013656; PAS_4.
DR InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR NCBIfam; TIGR00254; GGDEF; 1.
DR NCBIfam; TIGR00229; sensory_box; 1.
DR PANTHER; PTHR44757:SF11; DIGUANYLATE CYCLASE DGCE-RELATED; 1.
DR PANTHER; PTHR44757; DIGUANYLATE CYCLASE DGCP; 1.
DR Pfam; PF00563; EAL; 1.
DR Pfam; PF00990; GGDEF; 1.
DR Pfam; PF08448; PAS_4; 1.
DR SMART; SM00052; EAL; 1.
DR SMART; SM00267; GGDEF; 1.
DR SMART; SM00091; PAS; 1.
DR SUPFAM; SSF141868; EAL domain-like; 1.
DR SUPFAM; SSF55073; Nucleotide cyclase; 1.
DR SUPFAM; SSF55785; PYP-like sensor domain (PAS domain); 1.
DR PROSITE; PS50883; EAL; 1.
DR PROSITE; PS50887; GGDEF; 1.
DR PROSITE; PS50112; PAS; 1.
PE 4: Predicted;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000002015};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 7..30
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 234..254
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 307..351
FT /note="PAS"
FT /evidence="ECO:0000259|PROSITE:PS50112"
FT DOMAIN 458..591
FT /note="GGDEF"
FT /evidence="ECO:0000259|PROSITE:PS50887"
FT DOMAIN 602..856
FT /note="EAL"
FT /evidence="ECO:0000259|PROSITE:PS50883"
SQ SEQUENCE 870 AA; 97989 MW; CE05B1BD788F22D1 CRC64;
MRIGKKLIVF IVGFCLPAVI SVSYCLSMWF DHRVDTFKNS AVNIELSTIK TQIEKDINQL
QLLANVYALP LSKLAIEERK LLDEAWRDSQ LAEHLSLFYL NNGELQPFSP IYDDIMSFEF
DTVPVQLKHA TQPLSGIYML QDKSFIVSLV PVSQSRSIIL ARQLTPEYLS SYGLKGLVSH
INLVPGESSL VYDVNSDKPI SSIKVPSLVF ESPVHLEIQF AENAFNQVKL KYDLVTFSIV
GVGLLILIIG YIWLKLGLIR PFRRLMTQVA DIDPIAKTYT PLVGSGCSEL VIMAERVNTL
LARIFQQKER FKTTLESIAE AVILTDIGAK VVYLNPQAER LLGVKGESAI GVSVDSLVKT
DKSIKDDLFE FMFSQAQQPV LSKLKLKTDK TRILERSISN LLNQQRIVIG TVIVLRDITR
EELLKRQLRQ KANFDSITSL LNRRAFEERL EKFSHDAQSI AICYFDLEQF KLINDSCGHS
AGDTMLAMVA KAMQSCLSKD EMLARLGGDE FGLAIRDHNA SEVAQLVKRI VSSVSMQVLR
DNGCHYKVGV SAGVAIARAP YISPKELIKD ADVACIAAKR KGSNQVHFYD DNDKESIYQR
NAPMWAVRIG QAIEHNELLL YYQPIKGMGP GEHKQRMEIL LRIQEPCGRI LSPAQFIEAA
ERFKLMNDVD KEVIRKAFLW LSLHEEIWDD HCISINLSGN SLGAEGMVEY IAEQFKRFEI
PSKCICFEIT ETSAIQNRNR AMDMLNYLRK LGFSFALDDF GTGFASYGYL KELPVDYVKI
DGCFVKSLAT NAKDFAIVKS IHDVCDVMGI ETVAEFVENQ DIIDRLEDIG INYAQGYAIG
RPKPLETYIE LRRSRGQPLQ AKPALELISA
//
