ID A8N682_COPC7 Unreviewed; 1089 AA.
AC A8N682;
DT 15-JAN-2008, integrated into UniProtKB/TrEMBL.
DT 10-AUG-2010, sequence version 2.
DT 24-JAN-2024, entry version 98.
DE SubName: Full=mRNA export factor elf1 {ECO:0000313|EMBL:EAU91504.2};
GN ORFNames=CC1G_01993 {ECO:0000313|EMBL:EAU91504.2};
OS Coprinopsis cinerea (strain Okayama-7 / 130 / ATCC MYA-4618 / FGSC 9003)
OS (Inky cap fungus) (Hormographiella aspergillata).
OC Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes;
OC Agaricomycetidae; Agaricales; Agaricineae; Psathyrellaceae; Coprinopsis.
OX NCBI_TaxID=240176 {ECO:0000313|EMBL:EAU91504.2, ECO:0000313|Proteomes:UP000001861};
RN [1] {ECO:0000313|EMBL:EAU91504.2, ECO:0000313|Proteomes:UP000001861}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Okayama-7 / 130 / ATCC MYA-4618 / FGSC 9003
RC {ECO:0000313|Proteomes:UP000001861};
RX PubMed=20547848; DOI=10.1073/pnas.1003391107;
RA Stajich J.E., Wilke S.K., Ahren D., Au C.H., Birren B.W., Borodovsky M.,
RA Burns C., Canback B., Casselton L.A., Cheng C.K., Deng J., Dietrich F.S.,
RA Fargo D.C., Farman M.L., Gathman A.C., Goldberg J., Guigo R., Hoegger P.J.,
RA Hooker J.B., Huggins A., James T.Y., Kamada T., Kilaru S., Kodira C.,
RA Kues U., Kupfer D., Kwan H.S., Lomsadze A., Li W., Lilly W.W., Ma L.J.,
RA Mackey A.J., Manning G., Martin F., Muraguchi H., Natvig D.O.,
RA Palmerini H., Ramesh M.A., Rehmeyer C.J., Roe B.A., Shenoy N., Stanke M.,
RA Ter-Hovhannisyan V., Tunlid A., Velagapudi R., Vision T.J., Zeng Q.,
RA Zolan M.E., Pukkila P.J.;
RT "Insights into evolution of multicellular fungi from the assembled
RT chromosomes of the mushroom Coprinopsis cinerea (Coprinus cinereus).";
RL Proc. Natl. Acad. Sci. U.S.A. 107:11889-11894(2010).
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000256|ARBA:ARBA00004496}.
CC -!- SIMILARITY: Belongs to the ABC transporter superfamily. ABCF family.
CC EF3 subfamily. {ECO:0000256|ARBA:ARBA00011054}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EAU91504.2}.
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DR EMBL; AACS02000003; EAU91504.2; -; Genomic_DNA.
DR RefSeq; XP_001830357.2; XM_001830305.2.
DR AlphaFoldDB; A8N682; -.
DR STRING; 240176.A8N682; -.
DR GeneID; 6006797; -.
DR KEGG; cci:CC1G_01993; -.
DR VEuPathDB; FungiDB:CC1G_01993; -.
DR eggNOG; KOG0062; Eukaryota.
DR eggNOG; KOG1242; Eukaryota.
DR HOGENOM; CLU_002848_0_1_1; -.
DR InParanoid; A8N682; -.
DR OMA; EDHRKFG; -.
DR OrthoDB; 49929at2759; -.
DR Proteomes; UP000001861; Unassembled WGS sequence.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003746; F:translation elongation factor activity; IEA:UniProtKB-KW.
DR CDD; cd03221; ABCF_EF-3; 1.
DR CDD; cd18626; CD_eEF3; 1.
DR Gene3D; 2.40.50.990; -; 1.
DR Gene3D; 1.25.10.10; Leucine-rich Repeat Variant; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR003439; ABC_transporter-like_ATP-bd.
DR InterPro; IPR017871; ABC_transporter-like_CS.
DR InterPro; IPR011989; ARM-like.
DR InterPro; IPR016024; ARM-type_fold.
DR InterPro; IPR016197; Chromo-like_dom_sf.
DR InterPro; IPR000953; Chromo/chromo_shadow_dom.
DR InterPro; IPR023780; Chromo_domain.
DR InterPro; IPR023779; Chromodomain_CS.
DR InterPro; IPR015688; eEF3_ABC2_chromodomain-like.
DR InterPro; IPR047038; eEF3_chromodomain-like_sf.
DR InterPro; IPR021133; HEAT_type_2.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR034085; TOG.
DR PANTHER; PTHR19211:SF14; ATP-BINDING CASSETTE SUB-FAMILY F MEMBER 1; 1.
DR PANTHER; PTHR19211; ATP-BINDING TRANSPORT PROTEIN-RELATED; 1.
DR Pfam; PF00005; ABC_tran; 2.
DR Pfam; PF00385; Chromo; 1.
DR SMART; SM00382; AAA; 2.
DR SMART; SM00298; CHROMO; 1.
DR SMART; SM01349; TOG; 1.
DR SUPFAM; SSF48371; ARM repeat; 1.
DR SUPFAM; SSF54160; Chromo domain-like; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 2.
DR PROSITE; PS00211; ABC_TRANSPORTER_1; 1.
DR PROSITE; PS50893; ABC_TRANSPORTER_2; 2.
DR PROSITE; PS00598; CHROMO_1; 1.
DR PROSITE; PS50013; CHROMO_2; 1.
DR PROSITE; PS50077; HEAT_REPEAT; 1.
PE 3: Inferred from homology;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Cytoplasm {ECO:0000256|ARBA:ARBA00022490};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000001861};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884}.
FT REPEAT 88..123
FT /note="HEAT"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00103"
FT DOMAIN 443..675
FT /note="ABC transporter"
FT /evidence="ECO:0000259|PROSITE:PS50893"
FT DOMAIN 701..1017
FT /note="ABC transporter"
FT /evidence="ECO:0000259|PROSITE:PS50893"
FT DOMAIN 830..891
FT /note="Chromo"
FT /evidence="ECO:0000259|PROSITE:PS50013"
FT REGION 1008..1089
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1011..1037
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1059..1089
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1089 AA; 119400 MW; 030337D014B48419 CRC64;
MADNDFPALF EALKTAPTAP DARAAADRLA RQILKEGPQS MADANVISTL HSFATNKKSG
YERESAAMAF HSLATVIGAP GVPLLLPSLP VLYDLLMDKG DVVRSAASAA IKSILKLCPP
ESVPVVFRQL ETILDTAKWR SKVGVLDGLK SFVASSRDVV ASELGKVLPH VEKAMHDTKS
EVSSAATKCA TALCTTLANP DLTAHIPALV KCMAEPGSVP ACIKSLSNTT FVAEVKAPAL
AVLVPLLQRA LNDRSMEVQR RTVIVIDNLV KLVRDPRVAA TYLSPLLDGV EKIAHGASFP
EVRAFGQSAL ETLLKSGASA SGPPPEHRDI ETEIKDVLVA LRTLLPEELR SPSPNSPNAP
SEVKYSLLES SLKFAASLAA DLVHDRRFTD QNAWNRCIGV YMSLWIEKPQ AEAFAEAARA
HFHAIDQEKH KVVTGASSEE GELLCDTLFS LAYGALLLLS HTTLRLFRGR RYGILGANGS
GKSTLMRQLR DGKVENFPPP SQVKCVMVEH SLQGEDTSLN VIDFIASGVS RLVVSAVKLA
NGSADPQLTG VSRSEIQKQL SDVGFDEERQ REIVGGLSGG WKMKLELARA MLYKADLLLL
DEPTNHLDRA SVKWLEDWLL AQKQVTCLIV SHDSGFLDNV TSDIIHYEQK KLVYYPGNLS
AFVAKRPEAK SYYTLEASSV KFSFPPPGSL MGVRSNTRAI LKLQNCTFTY PGRDKPSLYD
VSCALSLSSR VGVVGPNGAG KSTMIKLITG ETTPQTGTVY KHPALRVGYV SQHATHHIER
HLEKTPIQYI QWRFQDGHDR ELLEKSTRVL TDEDKKLLDQ EWVGKDGSKR KLELIMGRQK
LKKSLQYEIK WRGLDHRFNT WVPREELLKK GFSKIVQQFD DLESSREGAG ARETSTHLVR
KHLEDIGLDG DIAQYNEISG LSGGQKIKLV IAACLWNNPQ ICVLDEPSNF LDREALGGLA
VAIKNWTGAV VIISHNHEFV SSLCPEIWNV ENGRMVQQGK TAVVEDFNEK AGRSGTNTPA
RSRLQTPAAS TAGTPAGSGA ENAAEARPVV KKKKKLTRNQ IKERDERRRL RLLRWLNEGG
PKPEDTDSD
//