ID A8X396_CAEBR Unreviewed; 310 AA.
AC A8X396;
DT 15-JAN-2008, integrated into UniProtKB/TrEMBL.
DT 15-JAN-2008, sequence version 1.
DT 27-MAR-2024, entry version 82.
DE SubName: Full=Protein CBG06875 {ECO:0000313|EMBL:CAP27106.1};
GN ORFNames=CBG06875 {ECO:0000313|EMBL:CAP27106.1}, CBG_06875
GN {ECO:0000313|EMBL:CAP27106.1};
OS Caenorhabditis briggsae.
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
OC Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
OC Caenorhabditis.
OX NCBI_TaxID=6238 {ECO:0000313|EMBL:CAP27106.1, ECO:0000313|Proteomes:UP000008549};
RN [1] {ECO:0000313|EMBL:CAP27106.1, ECO:0000313|Proteomes:UP000008549}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=AF16 {ECO:0000313|EMBL:CAP27106.1,
RC ECO:0000313|Proteomes:UP000008549};
RX PubMed=14624247; DOI=10.1371/journal.pbio.0000045;
RA Stein L.D., Bao Z., Blasiar D., Blumenthal T., Brent M.R., Chen N.,
RA Chinwalla A., Clarke L., Clee C., Coghlan A., Coulson A., D'Eustachio P.,
RA Fitch D.H., Fulton L.A., Fulton R.E., Griffiths-Jones S., Harris T.W.,
RA Hillier L.W., Kamath R., Kuwabara P.E., Mardis E.R., Marra M.A.,
RA Miner T.L., Minx P., Mullikin J.C., Plumb R.W., Rogers J., Schein J.E.,
RA Sohrmann M., Spieth J., Stajich J.E., Wei C., Willey D., Wilson R.K.,
RA Durbin R., Waterston R.H.;
RT "The genome sequence of Caenorhabditis briggsae: a platform for comparative
RT genomics.";
RL PLoS Biol. 1:166-192(2003).
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DR EMBL; HE601347; CAP27106.1; -; Genomic_DNA.
DR RefSeq; XP_002642463.1; XM_002642417.1.
DR AlphaFoldDB; A8X396; -.
DR STRING; 6238.A8X396; -.
DR GeneID; 8584457; -.
DR KEGG; cbr:CBG_06875; -.
DR CTD; 8584457; -.
DR eggNOG; KOG4740; Eukaryota.
DR HOGENOM; CLU_033666_5_1_1; -.
DR InParanoid; A8X396; -.
DR OMA; IVATHKW; -.
DR Proteomes; UP000008549; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 2.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR036397; RNaseH_sf.
DR InterPro; IPR000792; Tscrpt_reg_LuxR_C.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR PANTHER; PTHR46068; PROTEIN CBG27172; 1.
DR PANTHER; PTHR46068:SF1; PROTEIN CBG27172; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR PROSITE; PS00622; HTH_LUXR_1; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Reference proteome {ECO:0000313|Proteomes:UP000008549}.
FT DOMAIN 17..44
FT /note="HTH luxR-type"
FT /evidence="ECO:0000259|PROSITE:PS00622"
SQ SEQUENCE 310 AA; 35013 MW; 8D845AF053242F77 CRC64;
MKSSPHRPSI ELLFKRGLGS AEIARRLQIS SSTVRNVVAA IKKRGDASEV KKSGRPRSVN
TRNTRAIIKK RIIRNDGLSL NRMASQLGIA RSTVQSIVKN DLKLKSYKLR RGQYLSDKSK
AMRLEKCRKL LQHFQVRRVS DVIWTDEKIF TIEPLPNRQN QRQLLSKDDS MSPKRRLAHN
RLFPKSVMVW AGITATALCW RSIYPSTRLG TVPWLEIDIG RLGGAFPWIP GQELVACFQP
GSQSDGFQRL GMLEGKIAGK VFATVDDLKA ALEVAWASID DGYLRRTVNS VKKRLRACVK
ARGSNFEFLL
//
