ID A8X8Y5_CAEBR Unreviewed; 1590 AA.
AC A8X8Y5;
DT 15-JAN-2008, integrated into UniProtKB/TrEMBL.
DT 16-DEC-2008, sequence version 2.
DT 03-APR-2013, entry version 47.
DE SubName: Full=Protein CBR-NID-1;
GN Name=nid-1; Synonyms=Cbr-nid-1, cbr-nid-1; ORFNames=CBG09505,
GN CBG_09505;
OS Caenorhabditis briggsae.
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
OC Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis.
OX NCBI_TaxID=6238;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=AF16;
RX PubMed=14624247; DOI=10.1371/journal.pbio.0000045;
RA Stein L.D., Bao Z., Blasiar D., Blumenthal T., Brent M.R., Chen N.,
RA Chinwalla A., Clarke L., Clee C., Coghlan A., Coulson A.,
RA D'Eustachio P., Fitch D.H.A., Fulton L.A., Fulton R.E.,
RA Griffiths-Jones S., Harris T.W., Hillier L.W., Kamath R.,
RA Kuwabara P.E., Mardis E.R., Marra M.A., Miner T.L., Minx P.,
RA Mullikin J.C., Plumb R.W., Rogers J., Schein J.E., Sohrmann M.,
RA Spieth J., Stajich J.E., Wei C., Willey D., Wilson R.K., Durbin R.M.,
RA Waterston R.H.;
RT "The genome sequence of Caenorhabditis briggsae: a platform for
RT comparative genomics.";
RL PLoS Biol. 1:166-192(2003).
CC -!- CAUTION: The sequence shown here is derived from an
CC EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is
CC preliminary data.
CC -----------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution-NoDerivs License
CC -----------------------------------------------------------------------
DR EMBL; HE600998; CAP29096.1; -; Genomic_DNA.
DR STRING; 6238.CBG09505; -.
DR EnsemblMetazoa; CBG09505; CBG09505; CBG09505.
DR WormBase; CBG09505; CBP32801; WBGene00031073; Cbr-nid-1.
DR eggNOG; NOG282695; -.
DR HOGENOM; HOG000018918; -.
DR GO; GO:0005509; F:calcium ion binding; IEA:InterPro.
DR GO; GO:0007160; P:cell-matrix adhesion; IEA:InterPro.
DR Gene3D; 2.120.10.30; -; 1.
DR Gene3D; 2.40.155.10; -; 3.
DR InterPro; IPR011042; 6-blade_b-propeller_TolB-like.
DR InterPro; IPR000742; EG-like_dom.
DR InterPro; IPR001881; EGF-like_Ca-bd.
DR InterPro; IPR013032; EGF-like_CS.
DR InterPro; IPR000152; EGF-type_Asp/Asn_hydroxyl_site.
DR InterPro; IPR018097; EGF_Ca-bd_CS.
DR InterPro; IPR006605; G2_nidogen/fibulin_G2F.
DR InterPro; IPR009017; GFP.
DR InterPro; IPR023413; GFP_like.
DR InterPro; IPR000033; LDLR_classB_rpt.
DR InterPro; IPR003886; Nidogen_extracell_dom.
DR Pfam; PF07645; EGF_CA; 1.
DR Pfam; PF07474; G2F; 1.
DR Pfam; PF00058; Ldl_recept_b; 2.
DR Pfam; PF06119; NIDO; 1.
DR SMART; SM00181; EGF; 9.
DR SMART; SM00179; EGF_CA; 1.
DR SMART; SM00682; G2F; 1.
DR SMART; SM00135; LY; 5.
DR SMART; SM00539; NIDO; 1.
DR SUPFAM; SSF54511; GFP_like; 1.
DR PROSITE; PS00010; ASX_HYDROXYL; 2.
DR PROSITE; PS01186; EGF_2; 9.
DR PROSITE; PS50026; EGF_3; 12.
DR PROSITE; PS01187; EGF_CA; 1.
DR PROSITE; PS51120; LDLRB; 5.
DR PROSITE; PS51220; NIDO; 1.
DR PROSITE; PS50993; NIDOGEN_G2; 1.
PE 4: Predicted;
KW Complete proteome; Disulfide bond; EGF-like domain;
KW Reference proteome; Repeat.
SQ SEQUENCE 1590 AA; 175304 MW; D92D4A1431E82398 CRC64;
MKHKKVLILL LLSLLLETRG DGTQEFYPFG QPAGDTRLKY SLDQSAVALK TPLIFLQKPI
DEIFLSHNGI IGLGKPVPEK NEILAKIPTP AIAVFYSPVA NGKIDYRVTS DDQGLLAKLT
QDVKQAFTDA VDFHGLQAVV ITWSDIQNAE QDGPASFQIA IVTDGISTYC INHYGALPWS
SSMGYYAQTG FVRSVQMSRN FLRKIHLNNL GAKNDFRLSN NQFGNSFIFR ISGNSIEDPK
DDGTDEYDYN NYDQEYEGEQ PADCPKDKFV DNCPAECRTV RDERGCERCI CAERPNAPPV
PQEPRPELEN TVDDDDDEEE QVDGTRYQEP TREQEQQPQP QHNQHHQQSA GQTAQKMSCS
QRDDKSCHAN SVCQDLEGGF CCTCDTGYYG NGKECLPKGE PQRISGSFEG VINRIPIDKT
ELHTFATSTD GNVHTAVSKI PSDLGHPLLF LYSIGGVMGW LFADVQSPNV YNGFQLTGGL
FNRTVAIHVG QNNYVTLKQE FSGRNIHDYF KSHLFVSGTL PDIAPGSEVI FPDYEEEYVR
ERRGYLTSRA AFDVIIRDGG NTQTYRMSVE QQITFEECPF KEFDRDHSMK LHVKRINVVY
NADEGVVRYG AKNFATRSTS PASNSAPSGG HFDRRQHGQS QLASERPIEI PYNNEAISSD
SVCAPGRHQC TLPNMKCRVV DPSYRCECEP GYQATHDASS HIGWICQDLD ECQRGDHNCD
QHAKCTNRPG AFSCQCLPGY QGDGRSCIRE QHAGHHEHHQ HQQQSQHSGV GATSEGLCTA
HNQCHQWGEC VFTSEHPTGR CKCRGWYVGD GVNHCGPPEE NKPKHNAHIP QNRGQACGSY
VCDVNAECMP EPSGGSECVC KAGFSGNGIT CESLLEDRHA HSSHNRHEQQ QQTGSLGKVC
RSHEECSEHG SCAYHHNLGY YQCACTEPYV GNGVDCTLPG SSASASDLGC DVTRDCSEFA
DCVYERSSTG ATFRCVCQSG YTGDGKYCMQ SQLAISALSP AGQYPSFPQL QSQPSVQSIA
SCDPNCGADA QCVYDEHNKQ YRCECYTEFV GDGFNCVPLA KPNMVPAEPK TCVESSDCHS
NGHCVIDENG AGEYICKCLP GFRGDGFLNC RGADQCNPSN PNACHQNAHC AYDEVLTAHA
CKCVDGFKGD GVNCVPYAPA TNCNLEPRIC HANAQCVMHH TTGAYECICK PGSSGDGYKS
CDVMDTPRCT NCSVHAYCAQ NQMTGAYQCK CNAGYNGNGY VCVSMSSCLD DRSLCDSNAD
CVPGEGGHYV CNCHYGYHGD GKTCSPDSSS RTDKLLVARG MAIFKRSTNP DEYGKQLIVI
PHHIPVGIDY DCQTEKIVWS DMSGHSIRTA SMNGTDHKSF FSKELSSPEG IAVDWSSRNV
YYADSMNDEI GVASLNGKFK KSLVTEGLVN PRSVVLDLYG RHLYYSDWHR ENPYIGRVDM
DGKNNRVFLN EDIHLPNGLT ILPKRRELCW VDAGNHRLSC VQFNGANRRT VFSSLQYPFG
LTHDQEQKFY WTDWKDNRIH SVGVYGEGYR SFQISLGGSG KVFGILAVPK SCLGPNTPCS
ENNGGCEHLC LPGQNGAVCE CPDNVKVKGC
//