ID A8XHD6_CAEBR Unreviewed; 289 AA.
AC A8XHD6;
DT 15-JAN-2008, integrated into UniProtKB/TrEMBL.
DT 15-JAN-2008, sequence version 1.
DT 27-MAR-2024, entry version 84.
DE SubName: Full=Protein CBR-COL-96 {ECO:0000313|EMBL:CAP32060.1};
GN Name=col-96 {ECO:0000313|WormBase:CBG13239};
GN Synonyms=Cbr-col-96 {ECO:0000313|EMBL:CAP32060.1};
GN ORFNames=CBG13239 {ECO:0000313|WormBase:CBG13239}, CBG_13239
GN {ECO:0000313|EMBL:CAP32060.1};
OS Caenorhabditis briggsae.
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
OC Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
OC Caenorhabditis.
OX NCBI_TaxID=6238 {ECO:0000313|EMBL:CAP32060.1, ECO:0000313|Proteomes:UP000008549};
RN [1] {ECO:0000313|EMBL:CAP32060.1, ECO:0000313|Proteomes:UP000008549}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=AF16 {ECO:0000313|EMBL:CAP32060.1,
RC ECO:0000313|Proteomes:UP000008549};
RX PubMed=14624247; DOI=10.1371/journal.pbio.0000045;
RA Stein L.D., Bao Z., Blasiar D., Blumenthal T., Brent M.R., Chen N.,
RA Chinwalla A., Clarke L., Clee C., Coghlan A., Coulson A., D'Eustachio P.,
RA Fitch D.H., Fulton L.A., Fulton R.E., Griffiths-Jones S., Harris T.W.,
RA Hillier L.W., Kamath R., Kuwabara P.E., Mardis E.R., Marra M.A.,
RA Miner T.L., Minx P., Mullikin J.C., Plumb R.W., Rogers J., Schein J.E.,
RA Sohrmann M., Spieth J., Stajich J.E., Wei C., Willey D., Wilson R.K.,
RA Durbin R., Waterston R.H.;
RT "The genome sequence of Caenorhabditis briggsae: a platform for comparative
RT genomics.";
RL PLoS Biol. 1:166-192(2003).
CC -!- SUBUNIT: Collagen polypeptide chains are complexed within the cuticle
CC by disulfide bonds and other types of covalent cross-links.
CC {ECO:0000256|ARBA:ARBA00011518}.
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DR EMBL; HE601226; CAP32060.1; -; Genomic_DNA.
DR RefSeq; XP_002641382.1; XM_002641336.1.
DR AlphaFoldDB; A8XHD6; -.
DR STRING; 6238.A8XHD6; -.
DR EnsemblMetazoa; CBG13239.1; CBG13239.1; WBGene00034030.
DR GeneID; 8583374; -.
DR KEGG; cbr:CBG_13239; -.
DR CTD; 8583374; -.
DR WormBase; CBG13239; CBP09320; WBGene00034030; Cbr-col-96.
DR eggNOG; KOG3544; Eukaryota.
DR HOGENOM; CLU_001074_4_2_1; -.
DR InParanoid; A8XHD6; -.
DR OMA; GIRHHHH; -.
DR OrthoDB; 2883880at2759; -.
DR Proteomes; UP000008549; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0042302; F:structural constituent of cuticle; IEA:InterPro.
DR GO; GO:0048856; P:anatomical structure development; IEA:UniProt.
DR InterPro; IPR002486; Col_cuticle_N.
DR InterPro; IPR008160; Collagen.
DR PANTHER; PTHR24637:SF392; COL_CUTICLE_N DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR24637; COLLAGEN; 1.
DR Pfam; PF01484; Col_cuticle_N; 1.
DR Pfam; PF01391; Collagen; 2.
DR SMART; SM01088; Col_cuticle_N; 1.
PE 4: Predicted;
KW Disulfide bond {ECO:0000256|ARBA:ARBA00023157};
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000008549};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 12..36
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 12..64
FT /note="Nematode cuticle collagen N-terminal"
FT /evidence="ECO:0000259|SMART:SM01088"
FT REGION 96..264
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 115..146
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 289 AA; 28171 MW; 8C73D053AD817847 CRC64;
MDDITRRNAY RFVAYSAVTF SVVAVFSLCI TLPLVYNYVH GIKTQINHQI SFCKHSARDI
FSEVSHIRSN PNNATLREKR QTGECSGCCL PGAAGPAGTP GKPGRPGRPG TAGLPGNPGR
PPAQPCDPIT PPPCRPCPPG APGAPGAPGP QGDAGAPGAP GFGSGVGAPG PAGPKGAPGA
PGRPGQAGFP GQPGADAQSE SSQGAPGPAG PQGPPGPSGA PGHPGGSGFP GAPGPKGLSG
APGQPGANGN PGAPGQPGQS GGSGERGICP NYCAIDGGVF FDDGAFRRR
//
