ID A8Y4H9_CAEBR Unreviewed; 299 AA.
AC A8Y4H9;
DT 15-JAN-2008, integrated into UniProtKB/TrEMBL.
DT 15-JAN-2008, sequence version 1.
DT 27-MAR-2024, entry version 74.
DE SubName: Full=Protein CBG23185 {ECO:0000313|EMBL:CAP39799.1};
GN Name=col-157.1 {ECO:0000313|WormBase:CBG23185};
GN ORFNames=CBG23185 {ECO:0000313|EMBL:CAP39799.1,
GN ECO:0000313|WormBase:CBG23185}, CBG_23185
GN {ECO:0000313|EMBL:CAP39799.1};
OS Caenorhabditis briggsae.
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
OC Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
OC Caenorhabditis.
OX NCBI_TaxID=6238 {ECO:0000313|EMBL:CAP39799.1, ECO:0000313|Proteomes:UP000008549};
RN [1] {ECO:0000313|EMBL:CAP39799.1, ECO:0000313|Proteomes:UP000008549}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=AF16 {ECO:0000313|EMBL:CAP39799.1,
RC ECO:0000313|Proteomes:UP000008549};
RX PubMed=14624247; DOI=10.1371/journal.pbio.0000045;
RA Stein L.D., Bao Z., Blasiar D., Blumenthal T., Brent M.R., Chen N.,
RA Chinwalla A., Clarke L., Clee C., Coghlan A., Coulson A., D'Eustachio P.,
RA Fitch D.H., Fulton L.A., Fulton R.E., Griffiths-Jones S., Harris T.W.,
RA Hillier L.W., Kamath R., Kuwabara P.E., Mardis E.R., Marra M.A.,
RA Miner T.L., Minx P., Mullikin J.C., Plumb R.W., Rogers J., Schein J.E.,
RA Sohrmann M., Spieth J., Stajich J.E., Wei C., Willey D., Wilson R.K.,
RA Durbin R., Waterston R.H.;
RT "The genome sequence of Caenorhabditis briggsae: a platform for comparative
RT genomics.";
RL PLoS Biol. 1:166-192(2003).
CC -!- SUBUNIT: Collagen polypeptide chains are complexed within the cuticle
CC by disulfide bonds and other types of covalent cross-links.
CC {ECO:0000256|ARBA:ARBA00011518}.
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DR EMBL; HE601533; CAP39799.1; -; Genomic_DNA.
DR RefSeq; XP_002636510.1; XM_002636464.1.
DR AlphaFoldDB; A8Y4H9; -.
DR STRING; 6238.A8Y4H9; -.
DR EnsemblMetazoa; CBG23185.1; CBG23185.1; WBGene00041588.
DR GeneID; 8578505; -.
DR KEGG; cbr:CBG_23185; -.
DR CTD; 8578505; -.
DR WormBase; CBG23185; CBP05496; WBGene00041588; Cbr-col-157.1.
DR eggNOG; KOG3544; Eukaryota.
DR HOGENOM; CLU_001074_4_2_1; -.
DR InParanoid; A8Y4H9; -.
DR OMA; KPGWSRQ; -.
DR OrthoDB; 2883876at2759; -.
DR Proteomes; UP000008549; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0042302; F:structural constituent of cuticle; IEA:InterPro.
DR GO; GO:0048856; P:anatomical structure development; IEA:UniProt.
DR InterPro; IPR002486; Col_cuticle_N.
DR InterPro; IPR008160; Collagen.
DR PANTHER; PTHR24637:SF302; COL_CUTICLE_N DOMAIN-CONTAINING PROTEIN-RELATED; 1.
DR PANTHER; PTHR24637; COLLAGEN; 1.
DR Pfam; PF01484; Col_cuticle_N; 1.
DR Pfam; PF01391; Collagen; 2.
DR SMART; SM01088; Col_cuticle_N; 1.
PE 4: Predicted;
KW Disulfide bond {ECO:0000256|ARBA:ARBA00023157};
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000008549};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 12..35
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 12..64
FT /note="Nematode cuticle collagen N-terminal"
FT /evidence="ECO:0000259|SMART:SM01088"
FT REGION 107..280
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 113..162
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 211..236
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 299 AA; 29120 MW; D4D2EE38A918E34B CRC64;
MEFEQRIKAY RFVAYSAVAF SVVAVLSVCI TLPMVHNYVH HVKRTMNQEV QFCRGSAKDI
WSEVNQLKSI QHANRTARQA GYDAGVNGGS ASAGGCDACC LPGAAGPAGT PGKPGRPGKP
GAPGLPGNPG RPPQQPCDPV TPPPCQPCPQ GPPGPPGPPG PAGDAGSNGN PGSPGQDGQP
GAPGNKGPSG PNGNPGAPGA PGQPGQDAPS EPITPGAPGP QGAPGPQGPP GAPGQPGHDG
QPGAPGPKGP NGNPGQPGAD GNPGAPGQSG APGGAGEKGI CPKYCAIDGG VFFEDGTRR
//
