ID A9BRN3_DELAS Unreviewed; 395 AA.
AC A9BRN3;
DT 15-JAN-2008, integrated into UniProtKB/TrEMBL.
DT 15-JAN-2008, sequence version 1.
DT 27-MAR-2024, entry version 78.
DE SubName: Full=Integrase catalytic region {ECO:0000313|EMBL:ABX33600.1};
GN OrderedLocusNames=Daci_0954 {ECO:0000313|EMBL:ABX33600.1}, Daci_1567
GN {ECO:0000313|EMBL:ABX34211.1}, Daci_2308
GN {ECO:0000313|EMBL:ABX34946.1}, Daci_2452
GN {ECO:0000313|EMBL:ABX35090.1}, Daci_3168
GN {ECO:0000313|EMBL:ABX35806.1};
OS Delftia acidovorans (strain DSM 14801 / SPH-1).
OC Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
OC Comamonadaceae; Delftia.
OX NCBI_TaxID=398578 {ECO:0000313|EMBL:ABX33600.1, ECO:0000313|Proteomes:UP000000784};
RN [1] {ECO:0000313|EMBL:ABX33600.1, ECO:0000313|Proteomes:UP000000784}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 14801 / SPH-1 {ECO:0000313|Proteomes:UP000000784}, and
RC SPH-1 {ECO:0000313|EMBL:ABX33600.1};
RX PubMed=15240283; DOI=10.1128/AEM.70.7.4053-4063.2004;
RA Schleheck D., Knepper T.P., Fischer K., Cook A.M.;
RT "Mineralization of individual congeners of linear alkylbenzenesulfonate by
RT defined pairs of heterotrophic bacteria.";
RL Appl. Environ. Microbiol. 70:4053-4063(2004).
RN [2] {ECO:0000313|Proteomes:UP000000784}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 14801 / SPH-1 {ECO:0000313|Proteomes:UP000000784};
RA Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E.,
RA Tice H., Pitluck S., Lowry S., Clum A., Schmutz J., Larimer F., Land M.,
RA Hauser L., Kyrpides N., Kim E., Schleheck D., Richardson P.;
RT "Complete sequence of Delftia acidovorans DSM 14801 / SPH-1.";
RL Submitted (NOV-2007) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EMBL:ABX33600.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=SPH-1 {ECO:0000313|EMBL:ABX33600.1};
RG US DOE Joint Genome Institute;
RA Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E.,
RA Tice H., Pitluck S., Lowry S., Clum A., Schmutz J., Larimer F., Land M.,
RA Hauser L., Kyrpides N., Kim E., Schleheck D., Richardson P.;
RL Submitted (NOV-2007) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CP000884; ABX33600.1; -; Genomic_DNA.
DR EMBL; CP000884; ABX34211.1; -; Genomic_DNA.
DR EMBL; CP000884; ABX34946.1; -; Genomic_DNA.
DR EMBL; CP000884; ABX35090.1; -; Genomic_DNA.
DR EMBL; CP000884; ABX35806.1; -; Genomic_DNA.
DR AlphaFoldDB; A9BRN3; -.
DR STRING; 398578.Daci_0954; -.
DR KEGG; dac:Daci_0954; -.
DR KEGG; dac:Daci_1567; -.
DR KEGG; dac:Daci_2308; -.
DR KEGG; dac:Daci_2452; -.
DR KEGG; dac:Daci_3168; -.
DR eggNOG; COG2801; Bacteria.
DR eggNOG; COG3415; Bacteria.
DR HOGENOM; CLU_027402_15_3_4; -.
DR Proteomes; UP000000784; Chromosome.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0015074; P:DNA integration; IEA:InterPro.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR001584; Integrase_cat-core.
DR InterPro; IPR047656; IS481-like_transpos.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR036397; RNaseH_sf.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR NCBIfam; NF033577; transpos_IS481; 1.
DR PANTHER; PTHR47515:SF2; INTEGRASE CORE DOMAIN PROTEIN-RELATED; 1.
DR PANTHER; PTHR47515; LOW CALCIUM RESPONSE LOCUS PROTEIN T; 1.
DR Pfam; PF13565; HTH_32; 1.
DR Pfam; PF13683; rve_3; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR PROSITE; PS50994; INTEGRASE; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000000784}.
FT DOMAIN 140..307
FT /note="Integrase catalytic"
FT /evidence="ECO:0000259|PROSITE:PS50994"
SQ SEQUENCE 395 AA; 45841 MW; 6F4350257A4BC03A CRC64;
MPWKECAPMD EKLLFIADHL RGGAPLSELC RRYGISRKTA YKWVERYRQL GMDGLQERSR
RPHGNNQAIS YAQRRAIIEL RTQQRSQMGP KKLHALLLQR WGPQETPSKT TIYNVLKAEG
LVCSRRVRRR SVPTAQPLRT SKQPNGVWSA DYKGQFKTAD GHWCYPLTIM DHASRYLLAV
HVYDSPNYED AKRSFEQVFR QYGLPERIRS DNGPPFATTG VAGLSRLAIW WIRLGIRPER
IERGKPQQNG RHERMHRTLK HALGKEPAAD KAALQMQLDA FVEHYNQQRP HEALQQSMPA
QHYSDSARPY PSKLPELQYP KHWERVRVSH NGLIYWRALR VYIGYLLAGQ WIGMQEVAAG
QWDVYLGPVR LGCFNEEDVR GPQKDYVSLK CYPCL
//
