ID A9CEV8_AGRFC Unreviewed; 319 AA.
AC A9CEV8;
DT 15-JAN-2008, integrated into UniProtKB/TrEMBL.
DT 15-JAN-2008, sequence version 1.
DT 27-MAR-2024, entry version 70.
DE SubName: Full=ABC transporter, substrate binding protein (Ribose) {ECO:0000313|EMBL:AAK90167.1};
GN OrderedLocusNames=Atu3222 {ECO:0000313|EMBL:AAK90167.1};
OS Agrobacterium fabrum (strain C58 / ATCC 33970) (Agrobacterium tumefaciens
OS (strain C58)).
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
OC Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium;
OC Agrobacterium tumefaciens complex.
OX NCBI_TaxID=176299 {ECO:0000313|EMBL:AAK90167.1, ECO:0000313|Proteomes:UP000000813};
RN [1] {ECO:0000313|EMBL:AAK90167.1, ECO:0000313|Proteomes:UP000000813}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=C58 / ATCC 33970 {ECO:0000313|Proteomes:UP000000813};
RX PubMed=11743193; DOI=10.1126/science.1066804;
RA Wood D.W., Setubal J.C., Kaul R., Monks D.E., Kitajima J.P., Okura V.K.,
RA Zhou Y., Chen L., Wood G.E., Almeida N.F.Jr., Woo L., Chen Y.,
RA Paulsen I.T., Eisen J.A., Karp P.D., Bovee D.Sr., Chapman P.,
RA Clendenning J., Deatherage G., Gillet W., Grant C., Kutyavin T., Levy R.,
RA Li M.J., McClelland E., Palmieri A., Raymond C., Rouse G.,
RA Saenphimmachak C., Wu Z., Romero P., Gordon D., Zhang S., Yoo H., Tao Y.,
RA Biddle P., Jung M., Krespan W., Perry M., Gordon-Kamm B., Liao L., Kim S.,
RA Hendrick C., Zhao Z.Y., Dolan M., Chumley F., Tingey S.V., Tomb J.F.,
RA Gordon M.P., Olson M.V., Nester E.W.;
RT "The genome of the natural genetic engineer Agrobacterium tumefaciens
RT C58.";
RL Science 294:2317-2323(2001).
RN [2] {ECO:0000313|EMBL:AAK90167.1, ECO:0000313|Proteomes:UP000000813}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=C58 / ATCC 33970 {ECO:0000313|Proteomes:UP000000813};
RX PubMed=11743194; DOI=10.1126/science.1066803;
RA Goodner B., Hinkle G., Gattung S., Miller N., Blanchard M., Qurollo B.,
RA Goldman B.S., Cao Y., Askenazi M., Halling C., Mullin L., Houmiel K.,
RA Gordon J., Vaudin M., Iartchouk O., Epp A., Liu F., Wollam C., Allinger M.,
RA Doughty D., Scott C., Lappas C., Markelz B., Flanagan C., Crowell C.,
RA Gurson J., Lomo C., Sear C., Strub G., Cielo C., Slater S.;
RT "Genome sequence of the plant pathogen and biotechnology agent
RT Agrobacterium tumefaciens C58.";
RL Science 294:2323-2328(2001).
CC -!- SUBCELLULAR LOCATION: Periplasm {ECO:0000256|ARBA:ARBA00004418}.
CC -!- SIMILARITY: Belongs to the bacterial solute-binding protein 2 family.
CC {ECO:0000256|ARBA:ARBA00007639}.
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DR EMBL; AE007870; AAK90167.1; -; Genomic_DNA.
DR PIR; AH2952; AH2952.
DR PIR; E98330; E98330.
DR RefSeq; NP_357382.1; NC_003063.2.
DR RefSeq; WP_006314797.1; NC_003063.2.
DR AlphaFoldDB; A9CEV8; -.
DR STRING; 176299.Atu3222; -.
DR EnsemblBacteria; AAK90167; AAK90167; Atu3222.
DR GeneID; 66223534; -.
DR KEGG; atu:Atu3222; -.
DR PATRIC; fig|176299.10.peg.3063; -.
DR eggNOG; COG1879; Bacteria.
DR HOGENOM; CLU_037628_3_2_5; -.
DR OrthoDB; 9813037at2; -.
DR PhylomeDB; A9CEV8; -.
DR BioCyc; AGRO:ATU3222-MONOMER; -.
DR Proteomes; UP000000813; Chromosome linear.
DR GO; GO:0042597; C:periplasmic space; IEA:UniProtKB-SubCell.
DR GO; GO:0030246; F:carbohydrate binding; IEA:UniProt.
DR CDD; cd06309; PBP1_galactofuranose_YtfQ-like; 1.
DR Gene3D; 3.40.50.2300; -; 2.
DR InterPro; IPR028082; Peripla_BP_I.
DR InterPro; IPR025997; SBP_2_dom.
DR NCBIfam; NF041827; YtfQ_transport; 1.
DR PANTHER; PTHR46847; D-ALLOSE-BINDING PERIPLASMIC PROTEIN-RELATED; 1.
DR PANTHER; PTHR46847:SF3; GALACTOFURANOSE-BINDING PROTEIN YTFQ; 1.
DR Pfam; PF13407; Peripla_BP_4; 1.
DR SUPFAM; SSF53822; Periplasmic binding protein-like I; 1.
PE 3: Inferred from homology;
KW Periplasm {ECO:0000256|ARBA:ARBA00022764};
KW Reference proteome {ECO:0000313|Proteomes:UP000000813};
KW Signal {ECO:0000256|ARBA:ARBA00022729, ECO:0000256|SAM:SignalP};
KW Transport {ECO:0000256|ARBA:ARBA00022448}.
FT SIGNAL 1..22
FT /evidence="ECO:0000256|SAM:SignalP"
FT CHAIN 23..319
FT /evidence="ECO:0000256|SAM:SignalP"
FT /id="PRO_5002736435"
FT DOMAIN 28..287
FT /note="Periplasmic binding protein"
FT /evidence="ECO:0000259|Pfam:PF13407"
SQ SEQUENCE 319 AA; 34045 MW; 627A1FA8055463C2 CRC64;
MRKALATVTV AVSLCLASSV SAKSLTVGFS QIGSESGWRA AETTVTKQQA EKRGVTLKFA
DAQQKQENQI KAVRGFIAQG VDAILIAPVV ATGWDAVLKE AKEEKIPVIL LDRQIEAPDD
LYLTAVTSDQ VHEGKVAGDW LVKDVGSKDC KVVELQGTTG SSPAINRKKG FEEAIASHKN
IKIVRSQTGD FTRTKGKEVM ESFIKAEGGG KDICAVYAHN DDMAVGAIQA IKEAGLKPGT
DIKVVSIDAV PDIFKAMAAG EANATVELTP DMAGPAFDAL EAYLKDKKAP AKWIQTESKL
YTASDDPMKV YEAKKGLGY
//
