ID RL23_GLUDA Reviewed; 98 AA.
AC A9H3Q8; B5ZIG5;
DT 20-MAY-2008, integrated into UniProtKB/Swiss-Prot.
DT 05-FEB-2008, sequence version 1.
DT 01-MAY-2013, entry version 39.
DE RecName: Full=50S ribosomal protein L23;
GN Name=rplW; OrderedLocusNames=GDI3402, Gdia_2968;
OS Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 /
OS PAl5).
OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales;
OC Acetobacteraceae; Gluconacetobacter.
OX NCBI_TaxID=272568;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 49037 / DSM 5601 / PAl5;
RA Bertalan M., Baldani I.J., Ferreira P.;
RT "Gluconacetobacter diazotrophicus Pal5 complete genome.";
RL Submitted (SEP-2007) to the EMBL/GenBank/DDBJ databases.
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 49037 / DSM 5601 / PAl5;
RG US DOE Joint Genome Institute;
RA Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E.,
RA Tice H., Bruce D., Goodwin L., Pitluck S., Chertkov O., Brettin T.,
RA Detter J.C., Han C., Larimer F., Land M., Hauser L., Kyrpides N.,
RA Ovchinnikova G., Triplett E.W.;
RT "Complete sequence of chromosome of Gluconacetobacter diazotrophicus
RT PAl 5.";
RL Submitted (OCT-2008) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: One of the early assembly proteins it binds 23S rRNA.
CC One of the proteins that surrounds the polypeptide exit tunnel on
CC the outside of the ribosome. Forms the main docking site for
CC trigger factor binding to the ribosome (By similarity).
CC -!- SUBUNIT: Part of the 50S ribosomal subunit. Contacts protein L29,
CC and trigger factor when it is bound to the ribosome (By
CC similarity).
CC -!- SIMILARITY: Belongs to the ribosomal protein L23P family.
CC -!- SEQUENCE CAUTION:
CC Sequence=ACI52698.1; Type=Erroneous initiation;
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DR EMBL; AM889285; CAP57345.1; -; Genomic_DNA.
DR EMBL; CP001189; ACI52698.1; ALT_INIT; Genomic_DNA.
DR RefSeq; YP_001603633.1; NC_010125.1.
DR RefSeq; YP_002277313.1; NC_011365.1.
DR ProteinModelPortal; A9H3Q8; -.
DR SMR; A9H3Q8; 1-91.
DR STRING; 272568.GDI_3402; -.
DR PRIDE; A9H3Q8; -.
DR EnsemblBacteria; ACI52698; ACI52698; Gdia_2968.
DR EnsemblBacteria; CAP57345; CAP57345; GDI3402.
DR GeneID; 5790823; -.
DR GeneID; 6976402; -.
DR KEGG; gdi:GDI_3402; -.
DR KEGG; gdj:Gdia_2968; -.
DR PATRIC; 22054340; VBIGluDia203729_2944.
DR eggNOG; COG0089; -.
DR HOGENOM; HOG000231364; -.
DR KO; K02892; -.
DR OMA; HRAAKPD; -.
DR ProtClustDB; PRK05738; -.
DR BioCyc; GDIA272568:GJPS-3461-MONOMER; -.
DR GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR GO; GO:0000166; F:nucleotide binding; IEA:InterPro.
DR GO; GO:0019843; F:rRNA binding; IEA:HAMAP.
DR GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR GO; GO:0006412; P:translation; IEA:HAMAP.
DR Gene3D; 3.30.70.330; -; 1.
DR HAMAP; MF_01369_B; Ribosomal_L23_B; 1; -.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait.
DR InterPro; IPR012678; Ribosomal_L23/L15e_core_dom.
DR InterPro; IPR013025; Ribosomal_L25/23.
DR Pfam; PF00276; Ribosomal_L23; 1.
DR SUPFAM; SSF54189; L23_L15e_core; 1.
DR PROSITE; PS00050; RIBOSOMAL_L23; FALSE_NEG.
PE 3: Inferred from homology;
KW Complete proteome; Ribonucleoprotein; Ribosomal protein; RNA-binding;
KW rRNA-binding.
FT CHAIN 1 98 50S ribosomal protein L23.
FT /FTId=PRO_1000087219.
SQ SEQUENCE 98 AA; 10716 MW; 21F9D4ED56DD1E84 CRC64;
MSREAMYDIV RAPLITEKAT ALSEKNQVAF KVAIDATKPE IKVAVETLFG VKVLGVNTLV
QKGKTKRFKG RPGQRSDVKK AFVQLAEGQS IDLTAKLV
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