ID A9JQ51_PEDAC Unreviewed; 225 AA.
AC A9JQ51;
DT 05-FEB-2008, integrated into UniProtKB/TrEMBL.
DT 05-FEB-2008, sequence version 1.
DT 13-SEP-2023, entry version 52.
DE SubName: Full=DNA-directed RNA polymerase subunit alpha {ECO:0000313|EMBL:CAP16871.1};
DE Flags: Fragment;
GN Name=rpoA {ECO:0000313|EMBL:CAP16871.1};
OS Pediococcus acidilactici.
OC Bacteria; Bacillota; Bacilli; Lactobacillales; Lactobacillaceae;
OC Pediococcus; Pediococcus acidilactici group.
OX NCBI_TaxID=1254 {ECO:0000313|EMBL:CAP16871.1};
RN [1] {ECO:0000313|EMBL:CAP16871.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=Type strain: LMG 11384 {ECO:0000313|EMBL:CAP16871.1};
RA De Bruyne K., Franz C.M., Vancanneyt M., Schillinger U., Mozzi F.,
RA de Valdez G.F., De Vuyst L., Vandamme P.;
RT "Pediococcus argentinicus sp. nov. from Argentinean fermented wheat flour
RT and identification of Pediococcus species by pheS, rpoA and atpA sequence
RT analysis.";
RL Int. J. Syst. Evol. Microbiol. 58:2909-2916(2008).
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DR EMBL; AM899868; CAP16871.1; -; Genomic_DNA.
DR AlphaFoldDB; A9JQ51; -.
DR GO; GO:0000428; C:DNA-directed RNA polymerase complex; IEA:UniProtKB-KW.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0003899; F:DNA-directed 5'-3' RNA polymerase activity; IEA:InterPro.
DR GO; GO:0046983; F:protein dimerization activity; IEA:InterPro.
DR GO; GO:0006351; P:DNA-templated transcription; IEA:InterPro.
DR CDD; cd06928; RNAP_alpha_NTD; 1.
DR Gene3D; 2.170.120.12; DNA-directed RNA polymerase, insert domain; 1.
DR Gene3D; 3.30.1360.10; RNA polymerase, RBP11-like subunit; 1.
DR InterPro; IPR011262; DNA-dir_RNA_pol_insert.
DR InterPro; IPR011263; DNA-dir_RNA_pol_RpoA/D/Rpb3.
DR InterPro; IPR011773; DNA-dir_RpoA.
DR InterPro; IPR036603; RBP11-like.
DR InterPro; IPR036643; RNApol_insert_sf.
DR NCBIfam; TIGR02027; rpoA; 1.
DR Pfam; PF01000; RNA_pol_A_bac; 1.
DR Pfam; PF01193; RNA_pol_L; 1.
DR SMART; SM00662; RPOLD; 1.
DR SUPFAM; SSF56553; Insert subdomain of RNA polymerase alpha subunit; 1.
DR SUPFAM; SSF55257; RBP11-like subunits of RNA polymerase; 1.
PE 4: Predicted;
KW DNA-directed RNA polymerase {ECO:0000256|ARBA:ARBA00022478,
KW ECO:0000313|EMBL:CAP16871.1};
KW Transcription {ECO:0000256|ARBA:ARBA00023163}.
FT DOMAIN 1..197
FT /note="DNA-directed RNA polymerase RpoA/D/Rpb3-type"
FT /evidence="ECO:0000259|SMART:SM00662"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:CAP16871.1"
FT NON_TER 225
FT /evidence="ECO:0000313|EMBL:CAP16871.1"
SQ SEQUENCE 225 AA; 24543 MW; C76E6476841DEC6D CRC64;
GTTLGNSLRR ILLSSLPGAA ITSVQIDNVL HEFSTIEGVV EDVTQIILNL KKVSLKIESD
DEKTLDINVV GPANVTAGDI MGDGDVTVLN PDSPICTVAE GTTFHAVLTA DTGRGYTSAD
ENKARKADMP IGVLPIDSIY TPIERVNYQV EKTRVGQRDD YDKLTLDIWT DGSITPSEAT
SLSAKILTEH LAIFVNLNDQ AKETEIMVEK EETHKEKMLE MTIEE
//
