ID A9U8F0_PHYPA Unreviewed; 244 AA.
AC A9U8F0;
DT 05-FEB-2008, integrated into UniProtKB/TrEMBL.
DT 05-FEB-2008, sequence version 1.
DT 24-JAN-2024, entry version 86.
DE SubName: Full=Predicted protein {ECO:0000313|EMBL:EDQ48053.1};
DE Flags: Fragment;
GN ORFNames=PHYPADRAFT_104365 {ECO:0000313|EMBL:EDQ48053.1};
OS Physcomitrium patens (Spreading-leaved earth moss) (Physcomitrella patens).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Bryophyta;
OC Bryophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrium.
OX NCBI_TaxID=3218;
RN [1] {ECO:0000313|EMBL:EDQ48053.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=18079367; DOI=10.1126/science.1150646;
RA Rensing S.A., Lang D., Zimmer A.D., Terry A., Salamov A., Shapiro H.,
RA Nishiyama T., Perroud P.-F., Lindquist E.A., Kamisugi Y., Tanahashi T.,
RA Sakakibara K., Fujita T., Oishi K., Shin-I T., Kuroki Y., Toyoda A.,
RA Suzuki Y., Hashimoto S.-I., Yamaguchi K., Sugano S., Kohara Y.,
RA Fujiyama A., Anterola A., Aoki S., Ashton N., Barbazuk W.B., Barker E.,
RA Bennetzen J.L., Blankenship R., Cho S.H., Dutcher S.K., Estelle M.,
RA Fawcett J.A., Gundlach H., Hanada K., Heyl A., Hicks K.A., Hughes J.,
RA Lohr M., Mayer K., Melkozernov A., Murata T., Nelson D.R., Pils B.,
RA Prigge M., Reiss B., Renner T., Rombauts S., Rushton P.J., Sanderfoot A.,
RA Schween G., Shiu S.-H., Stueber K., Theodoulou F.L., Tu H., Van de Peer Y.,
RA Verrier P.J., Waters E., Wood A., Yang L., Cove D., Cuming A.C., Hasebe M.,
RA Lucas S., Mishler B.D., Reski R., Grigoriev I.V., Quatrano R.S.,
RA Boore J.L.;
RT "The Physcomitrella genome reveals evolutionary insights into the conquest
RT of land by plants.";
RL Science 319:64-69(2008).
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DR EMBL; DS546984; EDQ48053.1; -; Genomic_DNA.
DR RefSeq; XP_001787133.1; XM_001787081.1.
DR AlphaFoldDB; A9U8F0; -.
DR eggNOG; ENOG502SG7U; Eukaryota.
DR HOGENOM; CLU_047522_4_0_1; -.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR CDD; cd05233; SDR_c; 1.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR Gene3D; 3.40.50.720; NAD(P)-binding Rossmann-like Domain; 1.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR018060; HTH_AraC.
DR InterPro; IPR036291; NAD(P)-bd_dom_sf.
DR InterPro; IPR002347; SDR_fam.
DR PANTHER; PTHR47894; HTH-TYPE TRANSCRIPTIONAL REGULATOR GADX; 1.
DR PANTHER; PTHR47894:SF1; HTH-TYPE TRANSCRIPTIONAL REGULATOR VQSM; 1.
DR Pfam; PF00106; adh_short; 1.
DR Pfam; PF12833; HTH_18; 1.
DR PRINTS; PR00081; GDHRDH.
DR SMART; SM00342; HTH_ARAC; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR SUPFAM; SSF51735; NAD(P)-binding Rossmann-fold domains; 1.
DR PROSITE; PS01124; HTH_ARAC_FAMILY_2; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 49..147
FT /note="HTH araC/xylS-type"
FT /evidence="ECO:0000259|PROSITE:PS01124"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:EDQ48053.1"
FT NON_TER 244
FT /evidence="ECO:0000313|EMBL:EDQ48053.1"
SQ SEQUENCE 244 AA; 27902 MW; C0691FFBDB593D80 CRC64;
VGATRNRLTL HRRDLDRPFL SYNEELLDIL TPALDRSLDE QQRNRSFPET VKWILKRSLT
AGRPDIQAVA RELGMSDRTL QRRLTEENTS FKHLLTQARH EQAREYLADP SLDIKEVAFL
VGYEDQNSFY RAFRLWEGNT PSHWRAEHTA LVTGSTKGIG KAIAIELAKE GVHVLINGRN
DAEVEQTVNE IKANFPATSP QKATADLVDK GQREALFEKF PQVDILVNNM GIYEIMPYEN
VDDE
//
