GenomeNet

Database: UniProt
Entry: A9UQL0_MONBE
LinkDB: A9UQL0_MONBE
Original site: A9UQL0_MONBE 
ID   A9UQL0_MONBE            Unreviewed;      1051 AA.
AC   A9UQL0;
DT   05-FEB-2008, integrated into UniProtKB/TrEMBL.
DT   05-FEB-2008, sequence version 1.
DT   24-JAN-2024, entry version 52.
DE   RecName: Full=NFACT RNA-binding domain-containing protein {ECO:0008006|Google:ProtNLM};
DE   Flags: Fragment;
GN   ORFNames=MONBRDRAFT_628 {ECO:0000313|EMBL:EDQ92617.1};
OS   Monosiga brevicollis (Choanoflagellate).
OC   Eukaryota; Choanoflagellata; Craspedida; Salpingoecidae; Monosiga.
OX   NCBI_TaxID=81824 {ECO:0000313|EMBL:EDQ92617.1, ECO:0000313|Proteomes:UP000001357};
RN   [1] {ECO:0000313|EMBL:EDQ92617.1, ECO:0000313|Proteomes:UP000001357}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=MX1 / ATCC 50154 {ECO:0000313|Proteomes:UP000001357};
RX   PubMed=18273011; DOI=10.1038/nature06617;
RG   JGI Sequencing;
RA   King N., Westbrook M.J., Young S.L., Kuo A., Abedin M., Chapman J.,
RA   Fairclough S., Hellsten U., Isogai Y., Letunic I., Marr M., Pincus D.,
RA   Putnam N., Rokas A., Wright K.J., Zuzow R., Dirks W., Good M.,
RA   Goodstein D., Lemons D., Li W., Lyons J.B., Morris A., Nichols S.,
RA   Richter D.J., Salamov A., Bork P., Lim W.A., Manning G., Miller W.T.,
RA   McGinnis W., Shapiro H., Tjian R., Grigoriev I.V., Rokhsar D.;
RT   "The genome of the choanoflagellate Monosiga brevicollis and the origin of
RT   metazoans.";
RL   Nature 451:783-788(2008).
CC   -!- SIMILARITY: Belongs to the NEMF family.
CC       {ECO:0000256|ARBA:ARBA00008318}.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; CH991543; EDQ92617.1; -; Genomic_DNA.
DR   RefSeq; XP_001742379.1; XM_001742327.1.
DR   AlphaFoldDB; A9UQL0; -.
DR   STRING; 81824.A9UQL0; -.
DR   EnsemblProtists; EDQ92617; EDQ92617; MONBRDRAFT_628.
DR   GeneID; 5887636; -.
DR   KEGG; mbr:MONBRDRAFT_628; -.
DR   eggNOG; KOG2030; Eukaryota.
DR   InParanoid; A9UQL0; -.
DR   OMA; MFLEFFA; -.
DR   Proteomes; UP000001357; Unassembled WGS sequence.
DR   GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.
DR   GO; GO:1990112; C:RQC complex; IBA:GO_Central.
DR   GO; GO:0043023; F:ribosomal large subunit binding; IBA:GO_Central.
DR   GO; GO:0000049; F:tRNA binding; IBA:GO_Central.
DR   GO; GO:0072344; P:rescue of stalled ribosome; IBA:GO_Central.
DR   GO; GO:1990116; P:ribosome-associated ubiquitin-dependent protein catabolic process; IBA:GO_Central.
DR   Gene3D; 2.30.310.10; ibrinogen binding protein from staphylococcus aureus domain; 1.
DR   InterPro; IPR021846; NFACT-C.
DR   InterPro; IPR008532; NFACT_RNA-bd.
DR   PANTHER; PTHR15239; NUCLEAR EXPORT MEDIATOR FACTOR NEMF; 1.
DR   PANTHER; PTHR15239:SF6; NUCLEAR EXPORT MEDIATOR FACTOR NEMF; 1.
DR   Pfam; PF11923; NFACT-C; 1.
DR   Pfam; PF05670; NFACT-R_1; 1.
DR   Pfam; PF05833; NFACT_N; 1.
PE   3: Inferred from homology;
KW   Coiled coil {ECO:0000256|ARBA:ARBA00023054, ECO:0000256|SAM:Coils};
KW   Cytoplasm {ECO:0000256|ARBA:ARBA00022490};
KW   Reference proteome {ECO:0000313|Proteomes:UP000001357}.
FT   DOMAIN          531..641
FT                   /note="NFACT RNA-binding"
FT                   /evidence="ECO:0000259|Pfam:PF05670"
FT   DOMAIN          958..1050
FT                   /note="NFACT protein C-terminal"
FT                   /evidence="ECO:0000259|Pfam:PF11923"
FT   REGION          413..450
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          671..743
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          771..916
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COILED          298..363
FT                   /evidence="ECO:0000256|SAM:Coils"
FT   COMPBIAS        427..441
FT                   /note="Acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        714..730
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        771..791
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        814..828
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        865..880
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        892..908
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   NON_TER         1051
FT                   /evidence="ECO:0000313|EMBL:EDQ92617.1"
SQ   SEQUENCE   1051 AA;  116483 MW;  BE74E5F612AF49F6 CRC64;
     MKNRFSTLDL QVQLAELKPR LTGMRVANIY DIDNKTYLIR LQQTPEKAVL LIESGIRFHT
     TEYDWPKGDA PSGFTMKCRK HLRTRRLTDM KQLGVDRVID LTFGSDEAAY HLIIELYDRG
     NIILTESTYN ILALLRRRTD SEDVKFAVGE RYPIEASKQP SPITRERLEA AFASSKKGDP
     ARKALNPIME CGPQAIEHCM QLHGFPNNAK VGKGLAIPDD LDRVLAAMKQ AEDLLFEKLK
     AGDISVSATV VQYLPIDTIR LAEGDEAPVL VLDDVIPFMM KQFEDRPHIH LPSFDRAIDR
     YFSELETQKL QMRAMQQEAA ALKKLEAVKA SHEKHVEGYR LAQEANERKA QVLEANLEQV
     DRAIEIIRSM VANKLDWVEI AELVKEAQQQ GDPDARIIDG LKLDKNHMTI RLPNPEAHAE
     SSESDSSSAS DSEEEEEEEE QKAIAAASKK RGTSSATDPF LTIDLDLALT AYANACNMYQ
     HKKISAVKEQ KARDATELAI QSAERKTQQQ LQQNNVTTAV NKQRKIYWFE KFLWFISSEN
     YLVIGGRDRQ QNEILVRRYL KKGDVYVHAD LHGAASVIVK NPRGGDVPPI TLQEAGHMAV
     IYSGSWEARM PTSAWWVHHD QVSKTAPAGE YLSTGSFMIR GKKNYLPKVE LVMGFAILFK
     VDEGSVARHV NERRPRGLGE ASEASSPAVS RPPEPVEASS SGAGDASPVA AESEAGDSTA
     TQNKNKAESQ PAGTAVVAPE VPAESSSAMS TAAAMAFPDT EISVDYASAT PSASVSRTVS
     HAQSEADTAV RSRMQGSKAR LSAKQKRQLK KKGYTPAQMS SLTAAELQEL TGESGEDSEG
     EDDQRNEHAQ QPAVRGKRGK KKKKQQKYAE QDEDERQLRL DLLGSAGPQL SRADKRARRK
     EKLAAKQQAT RDPSEAVLQQ ISSVTDRIMA TAESVGLVTT EQTSKQEKID EQIQAQEEDQ
     LTYLDALTGL PHPDDELMFA LPVVAPYGAV RQYRFKAKIV PGEQKKGKAI RSLIHHFCTE
     TGASSAEVDV IKAIKDLELF RSVPGKIKVM A
//
DBGET integrated database retrieval system