ID A9UQL0_MONBE Unreviewed; 1051 AA.
AC A9UQL0;
DT 05-FEB-2008, integrated into UniProtKB/TrEMBL.
DT 05-FEB-2008, sequence version 1.
DT 24-JAN-2024, entry version 52.
DE RecName: Full=NFACT RNA-binding domain-containing protein {ECO:0008006|Google:ProtNLM};
DE Flags: Fragment;
GN ORFNames=MONBRDRAFT_628 {ECO:0000313|EMBL:EDQ92617.1};
OS Monosiga brevicollis (Choanoflagellate).
OC Eukaryota; Choanoflagellata; Craspedida; Salpingoecidae; Monosiga.
OX NCBI_TaxID=81824 {ECO:0000313|EMBL:EDQ92617.1, ECO:0000313|Proteomes:UP000001357};
RN [1] {ECO:0000313|EMBL:EDQ92617.1, ECO:0000313|Proteomes:UP000001357}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=MX1 / ATCC 50154 {ECO:0000313|Proteomes:UP000001357};
RX PubMed=18273011; DOI=10.1038/nature06617;
RG JGI Sequencing;
RA King N., Westbrook M.J., Young S.L., Kuo A., Abedin M., Chapman J.,
RA Fairclough S., Hellsten U., Isogai Y., Letunic I., Marr M., Pincus D.,
RA Putnam N., Rokas A., Wright K.J., Zuzow R., Dirks W., Good M.,
RA Goodstein D., Lemons D., Li W., Lyons J.B., Morris A., Nichols S.,
RA Richter D.J., Salamov A., Bork P., Lim W.A., Manning G., Miller W.T.,
RA McGinnis W., Shapiro H., Tjian R., Grigoriev I.V., Rokhsar D.;
RT "The genome of the choanoflagellate Monosiga brevicollis and the origin of
RT metazoans.";
RL Nature 451:783-788(2008).
CC -!- SIMILARITY: Belongs to the NEMF family.
CC {ECO:0000256|ARBA:ARBA00008318}.
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DR EMBL; CH991543; EDQ92617.1; -; Genomic_DNA.
DR RefSeq; XP_001742379.1; XM_001742327.1.
DR AlphaFoldDB; A9UQL0; -.
DR STRING; 81824.A9UQL0; -.
DR EnsemblProtists; EDQ92617; EDQ92617; MONBRDRAFT_628.
DR GeneID; 5887636; -.
DR KEGG; mbr:MONBRDRAFT_628; -.
DR eggNOG; KOG2030; Eukaryota.
DR InParanoid; A9UQL0; -.
DR OMA; MFLEFFA; -.
DR Proteomes; UP000001357; Unassembled WGS sequence.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.
DR GO; GO:1990112; C:RQC complex; IBA:GO_Central.
DR GO; GO:0043023; F:ribosomal large subunit binding; IBA:GO_Central.
DR GO; GO:0000049; F:tRNA binding; IBA:GO_Central.
DR GO; GO:0072344; P:rescue of stalled ribosome; IBA:GO_Central.
DR GO; GO:1990116; P:ribosome-associated ubiquitin-dependent protein catabolic process; IBA:GO_Central.
DR Gene3D; 2.30.310.10; ibrinogen binding protein from staphylococcus aureus domain; 1.
DR InterPro; IPR021846; NFACT-C.
DR InterPro; IPR008532; NFACT_RNA-bd.
DR PANTHER; PTHR15239; NUCLEAR EXPORT MEDIATOR FACTOR NEMF; 1.
DR PANTHER; PTHR15239:SF6; NUCLEAR EXPORT MEDIATOR FACTOR NEMF; 1.
DR Pfam; PF11923; NFACT-C; 1.
DR Pfam; PF05670; NFACT-R_1; 1.
DR Pfam; PF05833; NFACT_N; 1.
PE 3: Inferred from homology;
KW Coiled coil {ECO:0000256|ARBA:ARBA00023054, ECO:0000256|SAM:Coils};
KW Cytoplasm {ECO:0000256|ARBA:ARBA00022490};
KW Reference proteome {ECO:0000313|Proteomes:UP000001357}.
FT DOMAIN 531..641
FT /note="NFACT RNA-binding"
FT /evidence="ECO:0000259|Pfam:PF05670"
FT DOMAIN 958..1050
FT /note="NFACT protein C-terminal"
FT /evidence="ECO:0000259|Pfam:PF11923"
FT REGION 413..450
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 671..743
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 771..916
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 298..363
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 427..441
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 714..730
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 771..791
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 814..828
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 865..880
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 892..908
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT NON_TER 1051
FT /evidence="ECO:0000313|EMBL:EDQ92617.1"
SQ SEQUENCE 1051 AA; 116483 MW; BE74E5F612AF49F6 CRC64;
MKNRFSTLDL QVQLAELKPR LTGMRVANIY DIDNKTYLIR LQQTPEKAVL LIESGIRFHT
TEYDWPKGDA PSGFTMKCRK HLRTRRLTDM KQLGVDRVID LTFGSDEAAY HLIIELYDRG
NIILTESTYN ILALLRRRTD SEDVKFAVGE RYPIEASKQP SPITRERLEA AFASSKKGDP
ARKALNPIME CGPQAIEHCM QLHGFPNNAK VGKGLAIPDD LDRVLAAMKQ AEDLLFEKLK
AGDISVSATV VQYLPIDTIR LAEGDEAPVL VLDDVIPFMM KQFEDRPHIH LPSFDRAIDR
YFSELETQKL QMRAMQQEAA ALKKLEAVKA SHEKHVEGYR LAQEANERKA QVLEANLEQV
DRAIEIIRSM VANKLDWVEI AELVKEAQQQ GDPDARIIDG LKLDKNHMTI RLPNPEAHAE
SSESDSSSAS DSEEEEEEEE QKAIAAASKK RGTSSATDPF LTIDLDLALT AYANACNMYQ
HKKISAVKEQ KARDATELAI QSAERKTQQQ LQQNNVTTAV NKQRKIYWFE KFLWFISSEN
YLVIGGRDRQ QNEILVRRYL KKGDVYVHAD LHGAASVIVK NPRGGDVPPI TLQEAGHMAV
IYSGSWEARM PTSAWWVHHD QVSKTAPAGE YLSTGSFMIR GKKNYLPKVE LVMGFAILFK
VDEGSVARHV NERRPRGLGE ASEASSPAVS RPPEPVEASS SGAGDASPVA AESEAGDSTA
TQNKNKAESQ PAGTAVVAPE VPAESSSAMS TAAAMAFPDT EISVDYASAT PSASVSRTVS
HAQSEADTAV RSRMQGSKAR LSAKQKRQLK KKGYTPAQMS SLTAAELQEL TGESGEDSEG
EDDQRNEHAQ QPAVRGKRGK KKKKQQKYAE QDEDERQLRL DLLGSAGPQL SRADKRARRK
EKLAAKQQAT RDPSEAVLQQ ISSVTDRIMA TAESVGLVTT EQTSKQEKID EQIQAQEEDQ
LTYLDALTGL PHPDDELMFA LPVVAPYGAV RQYRFKAKIV PGEQKKGKAI RSLIHHFCTE
TGASSAEVDV IKAIKDLELF RSVPGKIKVM A
//