ID   A9XWB8_9ROSI            Unreviewed;      1281 AA.
AC   A9XWB8;
DT   05-FEB-2008, integrated into UniProtKB/TrEMBL.
DT   05-FEB-2008, sequence version 1.
DT   27-MAR-2024, entry version 50.
DE   RecName: Full=DNA-directed RNA polymerase {ECO:0000256|ARBA:ARBA00012418};
DE            EC=2.7.7.6 {ECO:0000256|ARBA:ARBA00012418};
DE   Flags: Fragment;
GN   Name=rpoC2 {ECO:0000313|EMBL:ABV65778.1};
OS   Strasburgeria robusta.
OG   Plastid; Chloroplast {ECO:0000313|EMBL:ABV65778.1}.
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Crossosomatales; Strasburgeriaceae; Strasburgeria.
OX   NCBI_TaxID=125056 {ECO:0000313|EMBL:ABV65778.1};
RN   [1] {ECO:0000313|EMBL:ABV65778.1}
RP   NUCLEOTIDE SEQUENCE.
RX   PubMed=19223592; DOI=10.1073/pnas.0813376106;
RA   Wang H., Moore M.J., Soltis P.S., Bell C.D., Brockington S.F.,
RA   Alexandre R., Davis C.C., Latvis M., Manchester S.R., Soltis D.E.;
RT   "Rosid radiation and the rapid rise of angiosperm-dominated forests.";
RL   Proc. Natl. Acad. Sci. U.S.A. 106:3853-3858(2009).
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; EU002544; ABV65778.1; -; Genomic_DNA.
DR   GO; GO:0009507; C:chloroplast; IEA:UniProtKB-KW.
DR   GO; GO:0000428; C:DNA-directed RNA polymerase complex; IEA:UniProtKB-KW.
DR   GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR   GO; GO:0003899; F:DNA-directed 5'-3' RNA polymerase activity; IEA:UniProtKB-EC.
DR   GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR   GO; GO:0006351; P:DNA-templated transcription; IEA:InterPro.
DR   CDD; cd02655; RNAP_beta'_C; 1.
DR   Gene3D; 1.10.132.30; -; 1.
DR   Gene3D; 1.10.150.390; -; 1.
DR   Gene3D; 1.10.1790.20; -; 1.
DR   HAMAP; MF_01324; RNApol_bact_RpoC2; 1.
DR   InterPro; IPR012756; DNA-dir_RpoC2_beta_pp.
DR   InterPro; IPR007083; RNA_pol_Rpb1_4.
DR   InterPro; IPR007081; RNA_pol_Rpb1_5.
DR   InterPro; IPR038120; Rpb1_funnel_sf.
DR   NCBIfam; TIGR02388; rpoC2_cyan; 1.
DR   PANTHER; PTHR48355; DNA-DIRECTED RNA POLYMERASE SUBUNIT BETA; 1.
DR   PANTHER; PTHR48355:SF1; DNA-DIRECTED RNA POLYMERASE SUBUNIT BETA; 1.
DR   Pfam; PF05000; RNA_pol_Rpb1_4; 1.
DR   Pfam; PF04998; RNA_pol_Rpb1_5; 2.
DR   SUPFAM; SSF64484; beta and beta-prime subunits of DNA dependent RNA-polymerase; 1.
PE   3: Inferred from homology;
KW   Chloroplast {ECO:0000313|EMBL:ABV65778.1};
KW   DNA-directed RNA polymerase {ECO:0000256|ARBA:ARBA00022478};
KW   Nucleotidyltransferase {ECO:0000256|ARBA:ARBA00022695};
KW   Plastid {ECO:0000313|EMBL:ABV65778.1};
KW   Transcription {ECO:0000256|ARBA:ARBA00023163};
KW   Transferase {ECO:0000256|ARBA:ARBA00022679};
KW   Zinc {ECO:0000256|ARBA:ARBA00022833}.
FT   DOMAIN          63..127
FT                   /note="RNA polymerase Rpb1"
FT                   /evidence="ECO:0000259|Pfam:PF05000"
FT   DOMAIN          142..334
FT                   /note="RNA polymerase Rpb1"
FT                   /evidence="ECO:0000259|Pfam:PF04998"
FT   DOMAIN          1168..1253
FT                   /note="RNA polymerase Rpb1"
FT                   /evidence="ECO:0000259|Pfam:PF04998"
FT   NON_TER         1
FT                   /evidence="ECO:0000313|EMBL:ABV65778.1"
FT   NON_TER         1281
FT                   /evidence="ECO:0000313|EMBL:ABV65778.1"
SQ   SEQUENCE   1281 AA;  145324 MW;  FF5D5711EAE832CB CRC64;
     GMAYTSHILD QVKTLGFQQA TATSISLGID DLLTIPSKGW LVQDAEQQSL IFEKHHHSGN
     VHAVEKLRQS IEIWYATSEY LRQEMNPNFR MTDPFNPVHI MSFSGARGNA SQVHQLVGMR
     GLMSDPQGQM IDLPIQSNLR EGLSLTEYII SCYGARKGVV DTAVRTSDAG YLTRRLVEVV
     QHIVVRRTDC GTVRGISVRP RNGMLPERIF IQTLIGRVLA DDIYIGPRCI AIRNQDIGIG
     LVNRFITFRT QPISIRTPFT CRSTSWICRF CYGRSPTHGD LVELGEAVGI IAGQSIGEPG
     TQLTLRTFHT GGVFTGGTAE HVRAPSNGKI KFNEDLVHPT RTRHGHPAFL CYIDLYVTIE
     SEDIIHNVTI PPKSFLLVQN DQYVESEQVI AEIRAGSYTF NFKERVRKHI YSDSEGEMHW
     STDVYHAPEF TYSNVHLLPK TSHLWILSGG LCRSSVVPFS PHKDQDQMSI HSISVERGYI
     SSLSVDNDQV RHKFFSSYLS GKKEVRIPDY SELNRIICTA HCHFIYPAIL HENFDLLAKR
     RRNRFIIPFQ SIQEQEKELL PHSGISIEIP INGIFRRNSI LAYFDDPQYR RNSSGITKYG
     TLGVHSIIKK EKEDLIEYRG VKEFKPKCQT KVDRFFFIPE EVHILPESSS IMVRNNSIIG
     VDTRITLNTR SRSGGLVRVE RKKGGVELKI FSGDIHFPGE TDKISRHSGI LIPPGTGKRN
     SKESKKLKNW IYVQRITPTK KKYFVLVRPV VTYEIADGIN LATLFPQDLL REGDNMQLRV
     VNYILYGNGK PIRGISDTSI QLVRTCLVLN WDQDKKSSSI EEARASFVEV STNGLIRDFL
     RIDLVKSHIS YIRKRNDLSG SGLISDNGSN RTKINPFYSK ARIKQSLSQN QGTVRTLLNR
     NKECQSLIIL SSSNCFRMGP FNDVKYHNVI KESIQIQKDP LIPIRNSLGP LGTELQIANF
     YSFYHFLTHN QISVTKYFQL DNLKLKQTLQ GLKYYLMDEN GRIYNLYPCS NIVLNPFNLN
     WYSLHHNYNH NYCEETSTII SLGQFICENV CIAKNGPHLK LKSGQVLIVQ IDFVVIRSAK
     PYLATPGATV HGHYREILYE GDTLVTFIYE KSRSGDITQG LPKVEQVLEV RSIDSISMNL
     EKRVEGWNKR ITRILGIPWG FLIGAELTIA QSHISLVNKI QKVYRSQGVQ IHNRHIEIIV
     RQITSKVLVS EDGMSNVFLP GELIGLLRAE RTGRALEEAI CYRAILLGIT RASLNTQSFI
     SEASFQETAR VLAKAALRGR I
//