ID B0BMJ5_XENTR Unreviewed; 469 AA.
AC B0BMJ5;
DT 26-FEB-2008, integrated into UniProtKB/TrEMBL.
DT 26-FEB-2008, sequence version 1.
DT 27-MAR-2024, entry version 59.
DE RecName: Full=DNA-directed RNA polymerase subunit {ECO:0000256|RuleBase:RU369086};
DE Flags: Fragment;
GN Name=LOC100145052 {ECO:0000313|EMBL:AAI58457.1};
OS Xenopus tropicalis (Western clawed frog) (Silurana tropicalis).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia;
OC Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana.
OX NCBI_TaxID=8364 {ECO:0000313|EMBL:AAI58457.1};
RN [1] {ECO:0000313|EMBL:AAI58457.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Embryo {ECO:0000313|EMBL:AAI58457.1};
RG NIH - Xenopus Gene Collection (XGC) project;
RL Submitted (JAN-2008) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: DNA-dependent RNA polymerase which catalyzes the
CC transcription of DNA into RNA using the four ribonucleoside
CC triphosphates as substrates. {ECO:0000256|RuleBase:RU369086}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|RuleBase:RU369086}.
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DR EMBL; BC158456; AAI58457.1; -; mRNA.
DR AlphaFoldDB; B0BMJ5; -.
DR HOGENOM; CLU_048289_0_0_1; -.
DR GO; GO:0000428; C:DNA-directed RNA polymerase complex; IEA:UniProtKB-KW.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0006352; P:DNA-templated transcription initiation; IEA:UniProtKB-UniRule.
DR CDD; cd04328; RNAP_I_Rpa43_N; 1.
DR Gene3D; 2.40.50.1060; -; 1.
DR Gene3D; 3.30.1490.120; RNA polymerase Rpb7-like, N-terminal domain; 1.
DR InterPro; IPR036898; RNA_pol_Rpb7-like_N_sf.
DR InterPro; IPR041901; RNAP_I_Rpa43_N.
DR InterPro; IPR041178; RPA43_OB.
DR InterPro; IPR045113; Rpb7-like.
DR PANTHER; PTHR12709:SF5; DNA-DIRECTED RNA POLYMERASE I SUBUNIT RPA43; 1.
DR PANTHER; PTHR12709; DNA-DIRECTED RNA POLYMERASE II, III; 1.
DR Pfam; PF17875; RPA43_OB; 1.
PE 2: Evidence at transcript level;
KW DNA-directed RNA polymerase {ECO:0000256|ARBA:ARBA00022478,
KW ECO:0000256|RuleBase:RU369086};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242, ECO:0000256|RuleBase:RU369086};
KW Transcription {ECO:0000256|ARBA:ARBA00023163,
KW ECO:0000256|RuleBase:RU369086}.
FT DOMAIN 119..250
FT /note="RPA43 OB"
FT /evidence="ECO:0000259|Pfam:PF17875"
FT REGION 201..387
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 407..469
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 201..225
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 256..270
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 302..326
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 371..387
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 448..463
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:AAI58457.1"
SQ SEQUENCE 469 AA; 51723 MW; B88EE1FB2C4ACF9C CRC64;
EAETAADSSV PEATAPARAL PSLALPSFSE ACELVRSRYS CLVVETHRRH LTLSPKFLQK
KRSGIQEQLN TDLLKYNEGL KGVPVAYDSI KLVGELGDIF DDLGHIHINI EADFVIFNPK
CGQTLVGIVN KVAPTHIGCL VHGCFNASIP KPPKMPIENW QRIGVNIDDE IEFEVFRLDS
DAVGVFCIRG KLDRRMEDKA YETPCEETAE QADDGTSDKD ADALESSNME SSVQENGDVQ
EKAKKKRKKQ KLQESLTQEA ESTGDHSIVT DPNLESPGEL HEDISNKERK KKKHRNVPGQ
NSESDAEKGV DSTILEDSNI TESPVNFKPK KSKKKSKEIS NSNSTSAFLN GVVEDESFSE
SATVEPEEMT ASGGDPDKVK KKHKHSFVEQ IPDSDLVTCI SSEGSLTKGL VISQETPKAK
KHKAKHQEHL LPGSGSGSSQ NKHKKAKRHH ENEPDTLAAE PKIKKRHKE
//
