ID B0RGA4_CLAMS Unreviewed; 678 AA.
AC B0RGA4;
DT 08-APR-2008, integrated into UniProtKB/TrEMBL.
DT 08-APR-2008, sequence version 1.
DT 27-MAR-2024, entry version 95.
DE SubName: Full=Glycogen debranching enzyme {ECO:0000313|EMBL:CAQ01160.1};
GN OrderedLocusNames=CMS1046 {ECO:0000313|EMBL:CAQ01160.1};
OS Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / DSM 20744
OS / JCM 9667 / LMG 2889 / C-1) (Corynebacterium sepedonicum).
OC Bacteria; Actinomycetota; Actinomycetes; Micrococcales; Microbacteriaceae;
OC Clavibacter.
OX NCBI_TaxID=31964 {ECO:0000313|EMBL:CAQ01160.1, ECO:0000313|Proteomes:UP000001318};
RN [1] {ECO:0000313|EMBL:CAQ01160.1, ECO:0000313|Proteomes:UP000001318}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 33113 / DSM 20744 / JCM 9667 / LMG 2889 / C-1
RC {ECO:0000313|Proteomes:UP000001318};
RX PubMed=18192393; DOI=10.1128/JB.01598-07;
RA Bentley S.D., Corton C., Brown S.E., Barron A., Clark L., Doggett J.,
RA Harris B., Ormond D., Quail M.A., May G., Francis D., Knudson D.,
RA Parkhill J., Ishimaru C.A.;
RT "Genome of the actinomycete plant pathogen Clavibacter michiganensis subsp.
RT sepedonicus suggests recent niche adaptation.";
RL J. Bacteriol. 190:2150-2160(2008).
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; AM849034; CAQ01160.1; -; Genomic_DNA.
DR AlphaFoldDB; B0RGA4; -.
DR STRING; 31964.CMS1046; -.
DR CAZy; CBM48; Carbohydrate-Binding Module Family 48.
DR CAZy; GH13; Glycoside Hydrolase Family 13.
DR KEGG; cms:CMS1046; -.
DR eggNOG; COG1523; Bacteria.
DR HOGENOM; CLU_011725_1_1_11; -.
DR Proteomes; UP000001318; Chromosome.
DR GO; GO:0004553; F:hydrolase activity, hydrolyzing O-glycosyl compounds; IEA:InterPro.
DR GO; GO:0005975; P:carbohydrate metabolic process; IEA:InterPro.
DR GO; GO:0043170; P:macromolecule metabolic process; IEA:UniProt.
DR CDD; cd11326; AmyAc_Glg_debranch; 1.
DR CDD; cd02856; E_set_GDE_Isoamylase_N; 1.
DR Gene3D; 3.20.20.80; Glycosidases; 1.
DR Gene3D; 2.60.40.1180; Golgi alpha-mannosidase II; 1.
DR Gene3D; 2.60.40.10; Immunoglobulins; 1.
DR InterPro; IPR044505; GlgX_Isoamylase_N_E_set.
DR InterPro; IPR006047; Glyco_hydro_13_cat_dom.
DR InterPro; IPR004193; Glyco_hydro_13_N.
DR InterPro; IPR013780; Glyco_hydro_b.
DR InterPro; IPR017853; Glycoside_hydrolase_SF.
DR InterPro; IPR013783; Ig-like_fold.
DR InterPro; IPR014756; Ig_E-set.
DR PANTHER; PTHR43002; GLYCOGEN DEBRANCHING ENZYME; 1.
DR PANTHER; PTHR43002:SF1; ISOAMYLASE 1, CHLOROPLASTIC; 1.
DR Pfam; PF02922; CBM_48; 1.
DR SMART; SM00642; Aamy; 1.
DR SUPFAM; SSF51445; (Trans)glycosidases; 1.
DR SUPFAM; SSF81296; E set domains; 1.
DR SUPFAM; SSF51011; Glycosyl hydrolase domain; 1.
PE 4: Predicted;
FT DOMAIN 132..554
FT /note="Glycosyl hydrolase family 13 catalytic"
FT /evidence="ECO:0000259|SMART:SM00642"
FT REGION 450..473
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 450..466
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 678 AA; 73524 MW; 05831286DEF1FF83 CRC64;
MPLGLTLSDQ GGTLRLVSHG ASAVELTVSA ADDPRRVAEV VAMERGDGGV WTGSSARLVP
GTAYSVRVDG DPAPGDSFDP TRHLLDPYAR GLVQVGPAAW RSVVTREVPA EERAARRAAR
PVVPRDRQVL YELHVRGFTK TDERLPEELR GTYAGLGHAS TVERLVDLGI TTVELLPVHA
STSEERLRAQ GRINHWGYNT LAYLAPHAPY ATRAARDAGA DAVAAEFRGM VDALHAAGIQ
VVLDVVYNHT AEEGADGPVT SLRGIDGSRY YRHAPDGTPI DVTGCGNTVD LSRPDAQRLV
LDSLEHWSDV MGVDGFRFDL AVTLGRDERV DFDPAHPLLR AIVEDEALAG LLMIAEPWDV
GMGGWRTGGF GSGWSEWNDG YRDVVRDFWL ADVAASRRTG GAPNGVGALA SCLAGSSGTF
AADRGPLASV SFVTAHDGFT LADLTSYDRK HNSGNGESNR DGTDANRSWN HGVEGPTRDA
RILAARRRSS RNLLGTLLVS AGIPMITMGD ERGRSQRGNN NGYCLDNAAT WMRWDEDAWR
MDLEATTRHL IRIRRDNPAL RPVRYAEPDA TVPSASVLAW RDADGAPMTE AAWESAGTRT
LQWISTSTPE TEGPNTVLVV VHGQETRATV TLPEHDGVTR WRLLWSSEWE RPEVVSIDDA
PGDRVEVDGP ALRIYLAR
//
