ID B0RGB6_CLAMS Unreviewed; 320 AA.
AC B0RGB6;
DT 08-APR-2008, integrated into UniProtKB/TrEMBL.
DT 08-APR-2008, sequence version 1.
DT 27-MAR-2024, entry version 76.
DE SubName: Full=Insertion element ISCmi2 transposase {ECO:0000313|EMBL:CAQ01172.1};
GN OrderedLocusNames=CMS1058 {ECO:0000313|EMBL:CAQ01172.1};
OS Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / DSM 20744
OS / JCM 9667 / LMG 2889 / C-1) (Corynebacterium sepedonicum).
OC Bacteria; Actinomycetota; Actinomycetes; Micrococcales; Microbacteriaceae;
OC Clavibacter.
OX NCBI_TaxID=31964 {ECO:0000313|EMBL:CAQ01172.1, ECO:0000313|Proteomes:UP000001318};
RN [1] {ECO:0000313|EMBL:CAQ01172.1, ECO:0000313|Proteomes:UP000001318}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 33113 / DSM 20744 / JCM 9667 / LMG 2889 / C-1
RC {ECO:0000313|Proteomes:UP000001318};
RX PubMed=18192393; DOI=10.1128/JB.01598-07;
RA Bentley S.D., Corton C., Brown S.E., Barron A., Clark L., Doggett J.,
RA Harris B., Ormond D., Quail M.A., May G., Francis D., Knudson D.,
RA Parkhill J., Ishimaru C.A.;
RT "Genome of the actinomycete plant pathogen Clavibacter michiganensis subsp.
RT sepedonicus suggests recent niche adaptation.";
RL J. Bacteriol. 190:2150-2160(2008).
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DR EMBL; AM849034; CAQ01172.1; -; Genomic_DNA.
DR RefSeq; WP_012298460.1; NZ_MZMN01000003.1.
DR AlphaFoldDB; B0RGB6; -.
DR STRING; 31964.CMS1058; -.
DR KEGG; cms:CMS1058; -.
DR eggNOG; COG2801; Bacteria.
DR HOGENOM; CLU_027402_15_0_11; -.
DR OrthoDB; 52928at2; -.
DR Proteomes; UP000001318; Chromosome.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0015074; P:DNA integration; IEA:InterPro.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR InterPro; IPR024967; DNA-bd_IS481-type.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR001584; Integrase_cat-core.
DR InterPro; IPR047656; IS481-like_transpos.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR036397; RNaseH_sf.
DR NCBIfam; NF033577; transpos_IS481; 1.
DR PANTHER; PTHR42648; TRANSPOSASE, PUTATIVE-RELATED; 1.
DR PANTHER; PTHR42648:SF11; TRANSPOSON TY4-P GAG-POL POLYPROTEIN; 1.
DR Pfam; PF13011; LZ_Tnp_IS481; 1.
DR Pfam; PF13683; rve_3; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR PROSITE; PS50994; INTEGRASE; 1.
PE 4: Predicted;
FT DOMAIN 133..316
FT /note="Integrase catalytic"
FT /evidence="ECO:0000259|PROSITE:PS50994"
FT REGION 50..73
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 320 AA; 36684 MW; 3A924500B2D2FC59 CRC64;
MTHANAPFAP VGRLRLARLI VEDGWPVRRA AERFQCSPAT ASRWARRYRA GLPMTDRSSR
PHRQPTRTSQ RRERRIVALR FTRRWGPHRI SYHLRIPRST VERVLRRYRM PLLTHLDSAT
GLPVRRSPAR RYEHSSPGDL VHVDIKKLGR IPDGGGHRVL GRAAGRKNNP RTGRGYAFLH
HAVDDHSRLA YSEILTDERK ETAAAFWARA NAFFTAAGIT VIRVLTDNGS CYRSHAFTEA
LGTIAHTRTR PYRPQTNGKV ERFNRTLATE WAYAHPYRTD EARAATYDAW LHHYNHHRPH
TGIGGLTPAE RVHNLTGNYS
//
