ID B1IDL1_CLOBK Unreviewed; 470 AA.
AC B1IDL1;
DT 29-APR-2008, integrated into UniProtKB/TrEMBL.
DT 29-APR-2008, sequence version 1.
DT 27-MAR-2024, entry version 97.
DE SubName: Full=Sigma-54 dependent transcriptional regulator {ECO:0000313|EMBL:ACA46618.1};
GN OrderedLocusNames=CLD_0161 {ECO:0000313|EMBL:ACA46618.1};
OS Clostridium botulinum (strain Okra / Type B1).
OC Bacteria; Bacillota; Clostridia; Eubacteriales; Clostridiaceae;
OC Clostridium.
OX NCBI_TaxID=498213 {ECO:0000313|EMBL:ACA46618.1, ECO:0000313|Proteomes:UP000008541};
RN [1] {ECO:0000313|EMBL:ACA46618.1, ECO:0000313|Proteomes:UP000008541}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Okra / Type B1 {ECO:0000313|Proteomes:UP000008541};
RX PubMed=18060065; DOI=10.1371/journal.pone.0001271;
RA Smith T.J., Hill K.K., Foley B.T., Detter J.C., Munk A.C., Bruce D.C.,
RA Doggett N.A., Smith L.A., Marks J.D., Xie G., Brettin T.S.;
RT "Analysis of the neurotoxin complex genes in Clostridium botulinum A1-A4
RT and B1 strains: BoNT/A3, /Ba4 and /B1 clusters are located within
RT plasmids.";
RL PLoS ONE 2:E1271-E1271(2007).
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DR EMBL; CP000939; ACA46618.1; -; Genomic_DNA.
DR RefSeq; WP_003356021.1; NC_010516.1.
DR AlphaFoldDB; B1IDL1; -.
DR KEGG; cbb:CLD_0161; -.
DR HOGENOM; CLU_000445_8_1_9; -.
DR Proteomes; UP000008541; Chromosome.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd00009; AAA; 1.
DR Gene3D; 1.10.8.60; -; 1.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR Gene3D; 3.30.450.20; PAS domain; 1.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR002197; HTH_Fis.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR035965; PAS-like_dom_sf.
DR InterPro; IPR002078; Sigma_54_int.
DR InterPro; IPR025943; Sigma_54_int_dom_ATP-bd_2.
DR InterPro; IPR025944; Sigma_54_int_dom_CS.
DR PANTHER; PTHR32071:SF119; SIGMA-54 INTERACTING PROTEIN; 1.
DR PANTHER; PTHR32071; TRANSCRIPTIONAL REGULATORY PROTEIN; 1.
DR Pfam; PF02954; HTH_8; 1.
DR Pfam; PF00158; Sigma54_activat; 1.
DR PRINTS; PR01590; HTHFIS.
DR SMART; SM00382; AAA; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR SUPFAM; SSF55785; PYP-like sensor domain (PAS domain); 1.
DR PROSITE; PS00676; SIGMA54_INTERACT_2; 1.
DR PROSITE; PS00688; SIGMA54_INTERACT_3; 1.
DR PROSITE; PS50045; SIGMA54_INTERACT_4; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 152..382
FT /note="Sigma-54 factor interaction"
FT /evidence="ECO:0000259|PROSITE:PS50045"
SQ SEQUENCE 470 AA; 53331 MW; 2CA975259146243C CRC64;
MENYDNSICL EDLFSDENGE KFLSISVLQT AFNVAYEGLI LIDENYNILK INTMGLNILN
STEDKLKKYS IKDIIRNYKF IDDCLQNGIH KFSIDSSFLI NNNSIRCITN IMPVKLQDSI
IGAIISIRDT RHIHKLVNNV VGYKASYTFD DIITKNQKMK SIIELAKKAS ESDCSILIDG
NSGTGKELFA QAIHNHSNRC HGPFVAVNCA AIPRELVESE LFGYEKGAFT GASKGGYPGK
FELADGGTIF LDEIGELPLD IQSKLLRVLD NLKIMRVGGT HEKKIDIRVL AATNRNLSEE
VSNKNFRGDL YYRLNVINVH LIPLKDRVED VEALTNCFVD KLNIKNPGNF KKIAPEFMDK
LKAYHWPGNV RELRNIVERS YYICEDNIIT DKFLNNKLMK NEHHNCCIGK EEPIVPLDIL
EHKAIEKALI HCKGNIVQAS ELLGISRATI YRKINKYNID LNEILEDKQN
//
