ID B1KD13_SHEWM Unreviewed; 411 AA.
AC B1KD13;
DT 29-APR-2008, integrated into UniProtKB/TrEMBL.
DT 29-APR-2008, sequence version 1.
DT 27-MAR-2024, entry version 79.
DE SubName: Full=Transposase {ECO:0000313|EMBL:ACA84360.1};
GN OrderedLocusNames=Swoo_0059 {ECO:0000313|EMBL:ACA84360.1}, Swoo_2161
GN {ECO:0000313|EMBL:ACA86445.1}, Swoo_3334
GN {ECO:0000313|EMBL:ACA87603.1}, Swoo_3467
GN {ECO:0000313|EMBL:ACA87733.1}, Swoo_3827
GN {ECO:0000313|EMBL:ACA88086.1};
OS Shewanella woodyi (strain ATCC 51908 / MS32).
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Alteromonadales;
OC Shewanellaceae; Shewanella.
OX NCBI_TaxID=392500 {ECO:0000313|EMBL:ACA84360.1, ECO:0000313|Proteomes:UP000002168};
RN [1] {ECO:0000313|EMBL:ACA84360.1, ECO:0000313|Proteomes:UP000002168}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 51908 {ECO:0000313|EMBL:ACA84360.1}, and ATCC 51908 / MS32
RC {ECO:0000313|Proteomes:UP000002168};
RG US DOE Joint Genome Institute;
RA Copeland A., Lucas S., Lapidus A., Glavina del Rio T., Dalin E., Tice H.,
RA Bruce D., Goodwin L., Pitluck S., Sims D., Brettin T., Detter J.C., Han C.,
RA Kuske C.R., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N.,
RA Lykidis A., Zhao J.-S., Richardson P.;
RT "Complete sequence of Shewanella woodyi ATCC 51908.";
RL Submitted (FEB-2008) to the EMBL/GenBank/DDBJ databases.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; CP000961; ACA84360.1; -; Genomic_DNA.
DR EMBL; CP000961; ACA86445.1; -; Genomic_DNA.
DR EMBL; CP000961; ACA87603.1; -; Genomic_DNA.
DR EMBL; CP000961; ACA87733.1; -; Genomic_DNA.
DR EMBL; CP000961; ACA88086.1; -; Genomic_DNA.
DR AlphaFoldDB; B1KD13; -.
DR KEGG; swd:Swoo_0059; -.
DR KEGG; swd:Swoo_2161; -.
DR KEGG; swd:Swoo_3334; -.
DR KEGG; swd:Swoo_3467; -.
DR KEGG; swd:Swoo_3827; -.
DR eggNOG; COG2801; Bacteria.
DR eggNOG; COG2963; Bacteria.
DR HOGENOM; CLU_139800_0_1_6; -.
DR Proteomes; UP000002168; Chromosome.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0015074; P:DNA integration; IEA:InterPro.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR001584; Integrase_cat-core.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR036397; RNaseH_sf.
DR InterPro; IPR048020; Transpos_IS3.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR NCBIfam; NF033516; transpos_IS3; 1.
DR PANTHER; PTHR46889:SF5; INTEGRASE PROTEIN-RELATED; 1.
DR PANTHER; PTHR46889; TRANSPOSASE INSF FOR INSERTION SEQUENCE IS3B-RELATED; 1.
DR Pfam; PF00665; rve; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR PROSITE; PS50994; INTEGRASE; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000002168}.
FT DOMAIN 244..405
FT /note="Integrase catalytic"
FT /evidence="ECO:0000259|PROSITE:PS50994"
SQ SEQUENCE 411 AA; 47519 MW; 4C61ADFEE2725040 CRC64;
MTTQIPTHVK RTQRDYSLGF KLQVVAAVEK GDMTYKQAQS IYGIQGRSTV LTWLRKHGKM
DWTQPVRITM PKTTKAKETP AQKIKRLEKE LEDEHLRNLL LNEAVDIIDA EYGAGLRKKV
LSQGARSLQK QKVTSLNRAC ELLGITRQAI YQRETRELCR AIELAPVKAM VLDIRRFMPR
VGGRKLYFLL KPKFIEKGIK LGRDNFFSYL KREGLLVKPK HNYTKTTHSK HWMKKHPNLL
KEFTPLSPEE VFVSDITYVQ SEQGVHYLSL VTDAFSRKIM GYELSDEMKA TDVVKALKMT
VNNRQYQGHA VHHSDRGLQY CSAVYQSALQ KNGIRASMTD GYDCYQNALA ERVNGILKQE
FLLYPCSNLD ELKRLVEESV FIYNEMRPHL SLGMRTPNQV HKKDQQQEQL V
//
