ID B1KH63_SHEWM Unreviewed; 543 AA.
AC B1KH63;
DT 29-APR-2008, integrated into UniProtKB/TrEMBL.
DT 29-APR-2008, sequence version 1.
DT 27-MAR-2024, entry version 80.
DE SubName: Full=Diguanylate cyclase with PAS/PAC sensor {ECO:0000313|EMBL:ACA88375.1};
DE Flags: Precursor;
GN OrderedLocusNames=Swoo_4119 {ECO:0000313|EMBL:ACA88375.1};
OS Shewanella woodyi (strain ATCC 51908 / MS32).
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Alteromonadales;
OC Shewanellaceae; Shewanella.
OX NCBI_TaxID=392500 {ECO:0000313|EMBL:ACA88375.1, ECO:0000313|Proteomes:UP000002168};
RN [1] {ECO:0000313|EMBL:ACA88375.1, ECO:0000313|Proteomes:UP000002168}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 51908 / MS32 {ECO:0000313|Proteomes:UP000002168};
RG US DOE Joint Genome Institute;
RA Copeland A., Lucas S., Lapidus A., Glavina del Rio T., Dalin E., Tice H.,
RA Bruce D., Goodwin L., Pitluck S., Sims D., Brettin T., Detter J.C., Han C.,
RA Kuske C.R., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N.,
RA Lykidis A., Zhao J.-S., Richardson P.;
RT "Complete sequence of Shewanella woodyi ATCC 51908.";
RL Submitted (FEB-2008) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CP000961; ACA88375.1; -; Genomic_DNA.
DR RefSeq; WP_012326704.1; NC_010506.1.
DR AlphaFoldDB; B1KH63; -.
DR STRING; 392500.Swoo_4119; -.
DR KEGG; swd:Swoo_4119; -.
DR eggNOG; COG2199; Bacteria.
DR HOGENOM; CLU_038372_1_0_6; -.
DR Proteomes; UP000002168; Chromosome.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR GO; GO:0007165; P:signal transduction; IEA:InterPro.
DR CDD; cd01949; GGDEF; 1.
DR CDD; cd06225; HAMP; 1.
DR Gene3D; 3.30.70.270; -; 1.
DR Gene3D; 6.10.340.10; -; 1.
DR Gene3D; 3.30.450.20; PAS domain; 1.
DR InterPro; IPR000160; GGDEF_dom.
DR InterPro; IPR003660; HAMP_dom.
DR InterPro; IPR029787; Nucleotide_cyclase.
DR InterPro; IPR000014; PAS.
DR InterPro; IPR035965; PAS-like_dom_sf.
DR InterPro; IPR013767; PAS_fold.
DR InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR NCBIfam; TIGR00254; GGDEF; 1.
DR NCBIfam; TIGR00229; sensory_box; 1.
DR PANTHER; PTHR46663; DIGUANYLATE CYCLASE DGCT-RELATED; 1.
DR PANTHER; PTHR46663:SF2; GGDEF DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF00990; GGDEF; 1.
DR Pfam; PF00672; HAMP; 1.
DR Pfam; PF00989; PAS; 1.
DR SMART; SM00267; GGDEF; 1.
DR SMART; SM00304; HAMP; 1.
DR SMART; SM00091; PAS; 1.
DR SUPFAM; SSF158472; HAMP domain-like; 1.
DR SUPFAM; SSF55073; Nucleotide cyclase; 1.
DR SUPFAM; SSF55785; PYP-like sensor domain (PAS domain); 1.
DR PROSITE; PS50887; GGDEF; 1.
DR PROSITE; PS50885; HAMP; 1.
PE 4: Predicted;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000002168};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 12..34
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 168..222
FT /note="HAMP"
FT /evidence="ECO:0000259|PROSITE:PS50885"
FT DOMAIN 395..535
FT /note="GGDEF"
FT /evidence="ECO:0000259|PROSITE:PS50887"
SQ SEQUENCE 543 AA; 60557 MW; 0774DA4EC71DD188 CRC64;
MRRFSRKLYF KVAAAIAVGA AIIAALSSFA FYFGEVARIQ ERARADIHQL VKTVEKTATI
AVYVQDQELA KEILTGLAMN DLVAAVELVS VAGFSLDSGS GSLLNLDHVE QIKLFHPFNE
AEQIGELRLL ADEVYINYNA KGSAVNQAQM LALLTVTTAL LVSLIVHQTL TSPLNEITDK
FEEVEPGKDI EIKVPRFHHG DEIGSLAKGI NRLISSLNSS IESERDMREK TEVLEKKFRL
IFEQASAGIC LIDGNNLLVT ANPAFQSILL KTHSISDAIG LKLTDWFHNQ EQLEAFLLKI
RHDNNLDTVA LDLKLKTQAD SRDCWVHCLF SKVMDCDKES GLIIEVLMYD VTERTEREVS
TRFEADHDAL THLKNRRAGE RLLRSLFNRA SENSEMAVIL NIDLDKFKAV NDIHGHEAGD
SVLVEVGKRL MSVFRNDDIC IRWGGDEFVV GCYFDTSRLE DRGEAAIASL GEKLVMTMSQ
NFSLSDDVTI EMGASVGISV YPQHGRDLER LLTVADLAMY QSKQAGRNQY SIYQPELSAQ
NLS
//
