ID RL23_THESQ Reviewed; 100 AA.
AC B1LBN8;
DT 14-APR-2009, integrated into UniProtKB/Swiss-Prot.
DT 29-APR-2008, sequence version 1.
DT 29-MAY-2013, entry version 40.
DE RecName: Full=50S ribosomal protein L23;
GN Name=rplW; OrderedLocusNames=TRQ2_1392;
OS Thermotoga sp. (strain RQ2).
OC Bacteria; Thermotogae; Thermotogales; Thermotogaceae; Thermotoga.
OX NCBI_TaxID=126740;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=RQ2;
RG US DOE Joint Genome Institute;
RA Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T.,
RA Dalin E., Tice H., Bruce D.B., Goodwin L., Pitluck S., Saunders E.,
RA Brettin T., Detter J.C., Han C., Schmutz J., Larimer F., Land M.,
RA Hauser L., Kyrpides N., Mikhailova N., Nelson K., Gogarten J.P.,
RA Noll K., Richardson P.;
RT "Complete sequence of Thermotoga sp. RQ2.";
RL Submitted (MAR-2008) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: One of the early assembly proteins it binds 23S rRNA.
CC One of the proteins that surrounds the polypeptide exit tunnel on
CC the outside of the ribosome. Forms the main docking site for
CC trigger factor binding to the ribosome (By similarity).
CC -!- SUBUNIT: Part of the 50S ribosomal subunit. Contacts protein L29,
CC and trigger factor when it is bound to the ribosome (By
CC similarity).
CC -!- SIMILARITY: Belongs to the ribosomal protein L23P family.
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DR EMBL; CP000969; ACB09736.1; -; Genomic_DNA.
DR RefSeq; YP_001739419.1; NC_010483.1.
DR ProteinModelPortal; B1LBN8; -.
DR STRING; 126740.TRQ2_1392; -.
DR EnsemblBacteria; ACB09736; ACB09736; TRQ2_1392.
DR GeneID; 6092834; -.
DR KEGG; trq:TRQ2_1392; -.
DR PATRIC; 23949406; VBITheSp108950_1416.
DR eggNOG; COG0089; -.
DR HOGENOM; HOG000231364; -.
DR KO; K02892; -.
DR OMA; KSMYALE; -.
DR ProtClustDB; PRK05738; -.
DR BioCyc; TSP126740:GH49-1435-MONOMER; -.
DR GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR GO; GO:0000166; F:nucleotide binding; IEA:InterPro.
DR GO; GO:0019843; F:rRNA binding; IEA:HAMAP.
DR GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR GO; GO:0006412; P:translation; IEA:HAMAP.
DR Gene3D; 3.30.70.330; -; 1.
DR HAMAP; MF_01369_B; Ribosomal_L23_B; 1; -.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait.
DR InterPro; IPR012678; Ribosomal_L23/L15e_core_dom.
DR InterPro; IPR001014; Ribosomal_L23/L25_CS.
DR InterPro; IPR013025; Ribosomal_L25/23.
DR Pfam; PF00276; Ribosomal_L23; 1.
DR SUPFAM; SSF54189; L23_L15e_core; 1.
DR PROSITE; PS00050; RIBOSOMAL_L23; 1.
PE 3: Inferred from homology;
KW Complete proteome; Ribonucleoprotein; Ribosomal protein; RNA-binding;
KW rRNA-binding.
FT CHAIN 1 100 50S ribosomal protein L23.
FT /FTId=PRO_1000144617.
SQ SEQUENCE 100 AA; 11715 MW; 2DC738D0906DFCC1 CRC64;
MKQEKLSLND VLIRPIITEK ALILREQRKY VFEVNPLANK NLVKEAVEKL FNVKVEKVNI
LNMKPKPKRR GIFEGKTRSW KKAVVTLKEG YTIKELEGEH
//
