ID B1NQH0_9POTV Unreviewed; 523 AA.
AC B1NQH0;
DT 29-APR-2008, integrated into UniProtKB/TrEMBL.
DT 29-APR-2008, sequence version 1.
DT 27-MAR-2024, entry version 58.
DE RecName: Full=Genome polyprotein {ECO:0000256|ARBA:ARBA00020107};
DE Flags: Fragment;
OS Sweet potato feathery mottle virus.
OC Viruses; Riboviria; Orthornavirae; Pisuviricota; Stelpaviricetes;
OC Patatavirales; Potyviridae; Potyvirus.
OX NCBI_TaxID=12844 {ECO:0000313|EMBL:ABV69051.1};
RN [1] {ECO:0000313|EMBL:ABV69051.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=EA {ECO:0000313|EMBL:ABV69051.1};
RX PubMed=18172571; DOI=10.1007/s00705-007-0019-0;
RA Untiveros M., Fuentes S., Kreuze J.;
RT "Molecular variability of sweet potato feathery mottle virus and other
RT potyviruses infecting sweet potato in Peru.";
RL Arch. Virol. 153:473-483(2008).
CC -!- FUNCTION: Involved in aphid transmission, cell-to-cell and systemis
CC movement, encapsidation of the viral RNA and in the regulation of viral
CC RNA amplification. {ECO:0000256|ARBA:ARBA00029405}.
CC -!- SUBCELLULAR LOCATION: Virion {ECO:0000256|ARBA:ARBA00004328}.
CC -!- SIMILARITY: Belongs to the potyviridae genome polyprotein family.
CC {ECO:0000256|ARBA:ARBA00006064, ECO:0000256|RuleBase:RU003351}.
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DR EMBL; EU021071; ABV69051.1; -; Genomic_RNA.
DR GO; GO:0019028; C:viral capsid; IEA:UniProtKB-KW.
DR GO; GO:0000166; F:nucleotide binding; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0003968; F:RNA-dependent RNA polymerase activity; IEA:UniProtKB-KW.
DR GO; GO:0006351; P:DNA-templated transcription; IEA:InterPro.
DR GO; GO:0039694; P:viral RNA genome replication; IEA:InterPro.
DR Gene3D; 3.30.70.270; -; 1.
DR InterPro; IPR043502; DNA/RNA_pol_sf.
DR InterPro; IPR001592; Poty_coat.
DR InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR InterPro; IPR001205; RNA-dir_pol_C.
DR InterPro; IPR007094; RNA-dir_pol_PSvirus.
DR Pfam; PF00767; Poty_coat; 1.
DR Pfam; PF00680; RdRP_1; 1.
DR SUPFAM; SSF56672; DNA/RNA polymerases; 1.
DR PROSITE; PS50507; RDRP_SSRNA_POS; 1.
PE 3: Inferred from homology;
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Nucleotidyltransferase {ECO:0000256|ARBA:ARBA00022695};
KW RNA-directed RNA polymerase {ECO:0000256|ARBA:ARBA00022484};
KW Transferase {ECO:0000256|ARBA:ARBA00022679};
KW Viral RNA replication {ECO:0000256|ARBA:ARBA00022953};
KW Virion {ECO:0000256|ARBA:ARBA00022844}.
FT DOMAIN 1..53
FT /note="RdRp catalytic"
FT /evidence="ECO:0000259|PROSITE:PS50507"
FT REGION 212..283
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 224..239
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 266..281
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:ABV69051.1"
SQ SEQUENCE 523 AA; 59069 MW; 24F9CE2C7C55850E CRC64;
STVVDNTLMV VLAVHYTLLK LGIQESEFDK CCVFFANGDD LLLAMRPDTA HLLDKFGECF
SELGLNYDFS SRTNKKEDLW FMSHCGVKRD GIFIPKLEPE RIVSILEWDR SHEPIHRLEA
ICAAMVESWG YDELLHHIRK FYAWVLDQAP YNELARNGKA PYIAETALKA LYTGVQPNAS
ELSAYTRVLK EMYDDSILQE NDLEVYHQSN ESTGFKDAGA DPPAPKPKNI PPPPTITEIT
DPEDPKQAAL KAARAKQPAV IPESYGRDTS KERESIVGTS SKGVRDKDVN VGTVGTFVVP
RVKMNANKKR QPMVNGRAII NFQHLSTYEP EQFEVANTRS TQEQFQAWYE GVKGDYGVDD
TGMGILLNGL MVWCIENGTS PNINGVWTMM DGDEQVTYPI KPLLDHAVPT FRQIMTHFSD
VAEAYIEMRN RTKAYMPRYG LQRNLTDMSL ARYAFDFYEL HSTTPARAKE AHLQMKAAAL
KNAKNRLFGL DGNVSTQEED TERHTTTDVT RNIHNLLGMR GVQ
//
