ID RS4_METPB Reviewed; 205 AA.
AC B1ZAP8;
DT 14-APR-2009, integrated into UniProtKB/Swiss-Prot.
DT 20-MAY-2008, sequence version 1.
DT 29-MAY-2013, entry version 35.
DE RecName: Full=30S ribosomal protein S4;
GN Name=rpsD; OrderedLocusNames=Mpop_5277;
OS Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001).
OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales;
OC Methylobacteriaceae; Methylobacterium.
OX NCBI_TaxID=441620;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC BAA-705 / NCIMB 13946 / BJ001;
RG US DOE Joint Genome Institute;
RA Copeland A., Lucas S., Lapidus A., Glavina del Rio T., Dalin E.,
RA Tice H., Bruce D., Goodwin L., Pitluck S., Chertkov O., Brettin T.,
RA Detter J.C., Han C., Kuske C.R., Schmutz J., Larimer F., Land M.,
RA Hauser L., Kyrpides N., Mikhailova N., Marx C., Richardson P.;
RT "Complete sequence of chromosome of Methylobacterium populi BJ001.";
RL Submitted (APR-2008) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: One of the primary rRNA binding proteins, it binds
CC directly to 16S rRNA where it nucleates assembly of the body of
CC the 30S subunit (By similarity).
CC -!- FUNCTION: With S5 and S12 plays an important role in translational
CC accuracy (By similarity).
CC -!- SUBUNIT: Part of the 30S ribosomal subunit. Contacts protein S5.
CC The interaction surface between S4 and S5 is involved in control
CC of translational fidelity (By similarity).
CC -!- SIMILARITY: Belongs to the ribosomal protein S4P family.
CC -!- SIMILARITY: Contains 1 S4 RNA-binding domain.
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DR EMBL; CP001029; ACB83371.1; -; Genomic_DNA.
DR RefSeq; YP_001927906.1; NC_010725.1.
DR ProteinModelPortal; B1ZAP8; -.
DR STRING; 441620.Mpop_5277; -.
DR EnsemblBacteria; ACB83371; ACB83371; Mpop_5277.
DR GeneID; 6313427; -.
DR KEGG; mpo:Mpop_5277; -.
DR PATRIC; 22567830; VBIMetPop124700_5304.
DR eggNOG; COG0522; -.
DR HOGENOM; HOG000221004; -.
DR KO; K02986; -.
DR OMA; YRCKPGD; -.
DR ProtClustDB; PRK05327; -.
DR BioCyc; MPOP441620:GHMI-5350-MONOMER; -.
DR GO; GO:0015935; C:small ribosomal subunit; IEA:InterPro.
DR GO; GO:0019843; F:rRNA binding; IEA:HAMAP.
DR GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR GO; GO:0006412; P:translation; IEA:HAMAP.
DR Gene3D; 1.10.1050.10; -; 1.
DR Gene3D; 3.10.290.10; -; 1.
DR HAMAP; MF_01306_B; Ribosomal_S4_B; 1; -.
DR InterPro; IPR022801; Ribosomal_S4/S9.
DR InterPro; IPR001912; Ribosomal_S4/S9_N.
DR InterPro; IPR005709; Ribosomal_S4_bac-type.
DR InterPro; IPR018079; Ribosomal_S4_CS.
DR InterPro; IPR002942; S4_RNA-bd.
DR PANTHER; PTHR11831; PTHR11831; 1.
DR Pfam; PF00163; Ribosomal_S4; 1.
DR Pfam; PF01479; S4; 1.
DR SMART; SM00363; S4; 1.
DR TIGRFAMs; TIGR01017; rpsD_bact; 1.
DR PROSITE; PS00632; RIBOSOMAL_S4; 1.
DR PROSITE; PS50889; S4; 1.
PE 3: Inferred from homology;
KW Complete proteome; Ribonucleoprotein; Ribosomal protein; RNA-binding;
KW rRNA-binding.
FT CHAIN 1 205 30S ribosomal protein S4.
FT /FTId=PRO_1000140758.
FT DOMAIN 94 155 S4 RNA-binding.
SQ SEQUENCE 205 AA; 23665 MW; B7269E81E17B1AF6 CRC64;
MSKRVQAKHK LDRRMGQNIW GRPKSPVNRR EYGPGQHGQR RKGKMSDFGT QLRAKQKLKG
YYGNITEKQF RRYYAEAIRL RGDSGENLIG LLERRLDAVV YRSKFVATPF AARQFVNHGH
IKVNGRRVNI PSYQVKAGDV IEVKEASRQL EIVVVASQLA ERDVPDYIEV DHQKMSARVT
RIPGLSEVPY PVQMEPNLVI EFYSR
//
