ID B1ZYQ7_OPITP Unreviewed; 788 AA.
AC B1ZYQ7;
DT 20-MAY-2008, integrated into UniProtKB/TrEMBL.
DT 20-MAY-2008, sequence version 1.
DT 27-MAR-2024, entry version 85.
DE SubName: Full=Glycogen debranching enzyme GlgX {ECO:0000313|EMBL:ACB75293.1};
GN OrderedLocusNames=Oter_2010 {ECO:0000313|EMBL:ACB75293.1};
OS Opitutus terrae (strain DSM 11246 / JCM 15787 / PB90-1).
OC Bacteria; Verrucomicrobiota; Opitutae; Opitutales; Opitutaceae; Opitutus.
OX NCBI_TaxID=452637 {ECO:0000313|EMBL:ACB75293.1, ECO:0000313|Proteomes:UP000007013};
RN [1] {ECO:0000313|EMBL:ACB75293.1, ECO:0000313|Proteomes:UP000007013}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 11246 / JCM 15787 / PB90-1
RC {ECO:0000313|Proteomes:UP000007013};
RX PubMed=21398538; DOI=10.1128/JB.00228-11;
RA van Passel M.W., Kant R., Palva A., Copeland A., Lucas S., Lapidus A.,
RA Glavina del Rio T., Pitluck S., Goltsman E., Clum A., Sun H., Schmutz J.,
RA Larimer F.W., Land M.L., Hauser L., Kyrpides N., Mikhailova N.,
RA Richardson P.P., Janssen P.H., de Vos W.M., Smidt H.;
RT "Genome sequence of the verrucomicrobium Opitutus terrae PB90-1, an
RT abundant inhabitant of rice paddy soil ecosystems.";
RL J. Bacteriol. 193:2367-2368(2011).
CC -!- SIMILARITY: Belongs to the glycosyl hydrolase 13 family.
CC {ECO:0000256|ARBA:ARBA00008061}.
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DR EMBL; CP001032; ACB75293.1; -; Genomic_DNA.
DR AlphaFoldDB; B1ZYQ7; -.
DR STRING; 452637.Oter_2010; -.
DR CAZy; CBM48; Carbohydrate-Binding Module Family 48.
DR CAZy; GH13; Glycoside Hydrolase Family 13.
DR KEGG; ote:Oter_2010; -.
DR eggNOG; COG1523; Bacteria.
DR HOGENOM; CLU_011725_1_1_0; -.
DR OrthoDB; 9761875at2; -.
DR Proteomes; UP000007013; Chromosome.
DR GO; GO:0004133; F:glycogen debranching enzyme activity; IEA:InterPro.
DR GO; GO:0004553; F:hydrolase activity, hydrolyzing O-glycosyl compounds; IEA:InterPro.
DR GO; GO:0005980; P:glycogen catabolic process; IEA:InterPro.
DR CDD; cd11326; AmyAc_Glg_debranch; 1.
DR CDD; cd02856; E_set_GDE_Isoamylase_N; 1.
DR Gene3D; 3.20.20.80; Glycosidases; 1.
DR Gene3D; 2.60.40.1180; Golgi alpha-mannosidase II; 1.
DR Gene3D; 2.60.40.10; Immunoglobulins; 1.
DR InterPro; IPR044505; GlgX_Isoamylase_N_E_set.
DR InterPro; IPR006047; Glyco_hydro_13_cat_dom.
DR InterPro; IPR004193; Glyco_hydro_13_N.
DR InterPro; IPR013780; Glyco_hydro_b.
DR InterPro; IPR011837; Glycogen_debranch_GlgX.
DR InterPro; IPR017853; Glycoside_hydrolase_SF.
DR InterPro; IPR013783; Ig-like_fold.
DR InterPro; IPR014756; Ig_E-set.
DR NCBIfam; TIGR02100; glgX_debranch; 1.
DR PANTHER; PTHR43002; GLYCOGEN DEBRANCHING ENZYME; 1.
DR PANTHER; PTHR43002:SF1; ISOAMYLASE 1, CHLOROPLASTIC; 1.
DR Pfam; PF00128; Alpha-amylase; 1.
DR Pfam; PF02922; CBM_48; 1.
DR SMART; SM00642; Aamy; 1.
DR SUPFAM; SSF51445; (Trans)glycosidases; 1.
DR SUPFAM; SSF81296; E set domains; 1.
DR SUPFAM; SSF51011; Glycosyl hydrolase domain; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000007013}.
FT DOMAIN 166..577
FT /note="Glycosyl hydrolase family 13 catalytic"
FT /evidence="ECO:0000259|SMART:SM00642"
FT REGION 475..494
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 711..788
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 788 AA; 88280 MW; 098CA443B33B31DE CRC64;
MKPTKVWKGH SYPLGATWTG SGVNFSLFSE NATGVELCLF DQLGEPETAR IKLTERSDQV
WHCFLPEIRP GQLYGYRVDG PYEPLKGHRF NRNKLLIDPY AKAIAGQVQW SDEMFSYTIG
HADGDLSFDA RDNAVLMPKA VVVNPVFAWG GDVRPDRAFH ETVIYETHVK GFSKLWEVLP
EHLRGTYAGI GSPHAIEYFK KLGVTAIELM PVHQHVTSKH LLDKGLSDYW GYNSLGFFAP
EPTYSSENGN RGAEVDEFRA MVRSLHAAGL EVILDVVYNH TAEGNHLGPT LGFRGIDNAS
YYRLTADNPR YYMDYTGTGN TLNVPNPRVL QLVMDSLRYW VLDMHVDGFR FDLATALARE
LHEVSRLSSF FDVIHQDPVL SQVKLIAEPW DVGEGGYQVG NFPVLWAEWN GRYRDTVRRY
WKGESGHMRD FAYRLCGSSD LYQSSGKTPT ASINFITSHD GFALRDLVSF NEKHNEANGE
NNQDGDNNNN SYNWGYEGLD APEEIRALRR RVKRNFLTTL LLSQGVPMLR GGDEAGATQR
GNNNAYCQDN EISWINWKLP PPEQQLLEFT SRLIQFRLQH PIFHQPNFFK GRDLRGTGVK
DITWFYPDGS EMDDEGWSAD FAKVLGFMLS GRSMDLRSYF GEPITDGTFL LYFNAHDGEV
EVTLPGRPNV GWRRILDTTD EAGFIESPRL RQGGSKHQLT AISLVLFQQE TGTDEEARNP
WEKIGGRGLP PRKGPTTSPF AASGVPAPAG PSATTPISMP NPARVPGSSG EAHRAPDLAP
AIPPKPTP
//
