ID   B2X2C1_CHLMO            Unreviewed;       903 AA.
AC   B2X2C1;
DT   01-JUL-2008, integrated into UniProtKB/TrEMBL.
DT   01-JUL-2008, sequence version 1.
DT   27-MAR-2024, entry version 45.
DE   RecName: Full=DNA-directed RNA polymerase {ECO:0000256|ARBA:ARBA00012418};
DE            EC=2.7.7.6 {ECO:0000256|ARBA:ARBA00012418};
GN   Name=rpoC2a {ECO:0000313|EMBL:ABU88334.1};
OS   Chlamydomonas moewusii (Chlamydomonas eugametos).
OG   Plastid; Chloroplast {ECO:0000313|EMBL:ABU88334.1}.
OC   Eukaryota; Viridiplantae; Chlorophyta; core chlorophytes; Chlorophyceae;
OC   CS clade; Chlamydomonadales; Chlamydomonadaceae; Chlamydomonas.
OX   NCBI_TaxID=3054 {ECO:0000313|EMBL:ABU88334.1};
RN   [1] {ECO:0000313|EMBL:ABU88334.1}
RP   NUCLEOTIDE SEQUENCE.
RC   STRAIN=UTEX 97 {ECO:0000313|EMBL:ABU88334.1};
RX   AGRICOLA=IND44059346; DOI=10.1111/j.1529-8817.2008.00510.x;
RA   Turmel M., Brouard J.-S., Gagnon C., Otis C., Lemieux C.;
RT   "Deep division in the Chlorophyceae (Chlorophyta) revealed by chloroplast
RT   phylogenomic analyseS.";
RL   J. Phycol. 44:739-750(2008).
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DR   EMBL; EF587491; ABU88334.1; -; Genomic_DNA.
DR   AlphaFoldDB; B2X2C1; -.
DR   GO; GO:0009507; C:chloroplast; IEA:UniProtKB-KW.
DR   GO; GO:0000428; C:DNA-directed RNA polymerase complex; IEA:UniProtKB-KW.
DR   GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR   GO; GO:0003899; F:DNA-directed 5'-3' RNA polymerase activity; IEA:UniProtKB-EC.
DR   GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR   GO; GO:0006351; P:DNA-templated transcription; IEA:InterPro.
DR   Gene3D; 1.10.132.30; -; 1.
DR   Gene3D; 1.10.274.100; RNA polymerase Rpb1, domain 3; 1.
DR   InterPro; IPR012756; DNA-dir_RpoC2_beta_pp.
DR   InterPro; IPR045867; DNA-dir_RpoC_beta_prime.
DR   InterPro; IPR007066; RNA_pol_Rpb1_3.
DR   InterPro; IPR042102; RNA_pol_Rpb1_3_sf.
DR   InterPro; IPR007083; RNA_pol_Rpb1_4.
DR   InterPro; IPR007081; RNA_pol_Rpb1_5.
DR   InterPro; IPR038120; Rpb1_funnel_sf.
DR   NCBIfam; TIGR02388; rpoC2_cyan; 1.
DR   PANTHER; PTHR19376; DNA-DIRECTED RNA POLYMERASE; 1.
DR   PANTHER; PTHR19376:SF54; DNA-DIRECTED RNA POLYMERASE SUBUNIT BETA; 1.
DR   Pfam; PF04983; RNA_pol_Rpb1_3; 1.
DR   Pfam; PF05000; RNA_pol_Rpb1_4; 1.
DR   Pfam; PF04998; RNA_pol_Rpb1_5; 1.
DR   SUPFAM; SSF64484; beta and beta-prime subunits of DNA dependent RNA-polymerase; 1.
PE   4: Predicted;
KW   Chloroplast {ECO:0000313|EMBL:ABU88334.1};
KW   DNA-directed RNA polymerase {ECO:0000256|ARBA:ARBA00022478};
KW   Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW   Nucleotidyltransferase {ECO:0000256|ARBA:ARBA00022695};
KW   Plastid {ECO:0000256|ARBA:ARBA00022640, ECO:0000313|EMBL:ABU88334.1};
KW   Transcription {ECO:0000256|ARBA:ARBA00023163};
KW   Transferase {ECO:0000256|ARBA:ARBA00022679}.
FT   DOMAIN          83..154
FT                   /note="RNA polymerase Rpb1"
FT                   /evidence="ECO:0000259|Pfam:PF04983"
FT   DOMAIN          183..261
FT                   /note="RNA polymerase Rpb1"
FT                   /evidence="ECO:0000259|Pfam:PF05000"
FT   DOMAIN          264..557
FT                   /note="RNA polymerase Rpb1"
FT                   /evidence="ECO:0000259|Pfam:PF04998"
FT   REGION          591..635
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        594..617
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   903 AA;  102097 MW;  EDE78664ABBB8332 CRC64;
     MSFFYFLQRE RNTNNHFVDR PVIFYEKTQT LSNLPSYKCN RKGPNSILRN LARQHAKRVD
     VALSKNLGSL KYFDSHKAKA FVVIKKNKQI VTATEIAKKC FWNQTFDKGR LKNFVLWFFL
     KYGEHKTVRL VEELKTIGFQ YATKAGISLG VEDLKIPPKK AALIYEAEKL SLSTIRQFKR
     GEITEVERFQ RLIDTWHRTS EQLKIEVIEN FEGTDVLNPV YMMAFSGARG NISQVRQLVG
     MRGLMSNPQG QIIDFPIRSN FREGLTLTEY IISSYGARKG IVDTALRTAN AGYLTRRLVD
     VAQHVIISTT DCGTTRGIFL NDMKEGNKTI YSLQNRLVGR VLARDVYNNQ NIKIASKNME
     ISGDLAILIA QHHKKIFVRS PLTCQTNKLV CQLCYGWSLA QGNLVSIGEA VGIVAAQSIG
     EPGTQLTMRT FHTGGVFSGN VSDQIKAPFD GFVVYNNPIA GKLIRTPEGK IAFLTKDEGS
     FSVYRFSKTK RSGDRIDQGT VSTKAGGFDP RKATSVPNDL NLETLEKRNF KIPFYTLLFL
     RNREKVFNKQ VIAQISSINR QKTATDQAEL TIKAEISGLF YSKNLEIEET RSGPGIKENT
     TGGTTKKQST ANTSLVTGRR RVPKKALAPQ SDQSAPHFAS EAQRLQSIVP PDALQEQSED
     HLLRELDIVD QSLVDIINKA WNWGYAWILS GKIYQLPFPS TFFPIFGDFV TKKTYMNCIN
     WYLPSTFGSG FKINRPLTYS VFNQKTIKKM RQTLFSKEEF NLSPRTDKLI GTFNQSKNLN
     KAPTSLLEKD FKLLKYDLIS FELSNILYKK IGYFLNLSQA SHTSTMDARG FAAGDHLQDN
     QEIKTSLINV NQNYALPVVF PQSVLTSINP RPELRVEREV EVYHPRKAVI SLDAKSPVLA
     SSF
//