ID B3RTG7_TRIAD Unreviewed; 704 AA.
AC B3RTG7;
DT 02-SEP-2008, integrated into UniProtKB/TrEMBL.
DT 02-SEP-2008, sequence version 1.
DT 27-MAR-2024, entry version 73.
DE RecName: Full=General transcription and DNA repair factor IIH helicase subunit XPB {ECO:0000256|ARBA:ARBA00014343};
DE EC=3.6.4.12 {ECO:0000256|ARBA:ARBA00012551};
GN ORFNames=TRIADDRAFT_22911 {ECO:0000313|EMBL:EDV26690.1};
OS Trichoplax adhaerens (Trichoplax reptans).
OC Eukaryota; Metazoa; Placozoa; Uniplacotomia; Trichoplacea; Trichoplacidae;
OC Trichoplax.
OX NCBI_TaxID=10228 {ECO:0000313|EMBL:EDV26690.1, ECO:0000313|Proteomes:UP000009022};
RN [1] {ECO:0000313|EMBL:EDV26690.1, ECO:0000313|Proteomes:UP000009022}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Grell-BS-1999 {ECO:0000313|EMBL:EDV26690.1,
RC ECO:0000313|Proteomes:UP000009022};
RX PubMed=18719581; DOI=10.1038/nature07191;
RA Srivastava M., Begovic E., Chapman J., Putnam N.H., Hellsten U.,
RA Kawashima T., Kuo A., Mitros T., Salamov A., Carpenter M.L.,
RA Signorovitch A.Y., Moreno M.A., Kamm K., Grimwood J., Schmutz J.,
RA Shapiro H., Grigoriev I.V., Buss L.W., Schierwater B., Dellaporta S.L.,
RA Rokhsar D.S.;
RT "The Trichoplax genome and the nature of placozoans.";
RL Nature 454:955-960(2008).
CC -!- CATALYTIC ACTIVITY:
CC Reaction=ATP + H2O = ADP + H(+) + phosphate; Xref=Rhea:RHEA:13065,
CC ChEBI:CHEBI:15377, ChEBI:CHEBI:15378, ChEBI:CHEBI:30616,
CC ChEBI:CHEBI:43474, ChEBI:CHEBI:456216; EC=3.6.4.12;
CC Evidence={ECO:0000256|ARBA:ARBA00001665};
CC -!- SIMILARITY: Belongs to the helicase family. RAD25/XPB subfamily.
CC {ECO:0000256|ARBA:ARBA00006637}.
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DR EMBL; DS985243; EDV26690.1; -; Genomic_DNA.
DR RefSeq; XP_002110686.1; XM_002110650.1.
DR AlphaFoldDB; B3RTG7; -.
DR STRING; 10228.B3RTG7; -.
DR EnsemblMetazoa; TriadT22911; TriadP22911; TriadG22911.
DR GeneID; 6752434; -.
DR KEGG; tad:TRIADDRAFT_22911; -.
DR CTD; 6752434; -.
DR eggNOG; KOG1123; Eukaryota.
DR HOGENOM; CLU_008213_0_0_1; -.
DR InParanoid; B3RTG7; -.
DR OMA; RCQEIDY; -.
DR OrthoDB; 1360679at2759; -.
DR PhylomeDB; B3RTG7; -.
DR Proteomes; UP000009022; Unassembled WGS sequence.
DR GO; GO:0000112; C:nucleotide-excision repair factor 3 complex; IBA:GO_Central.
DR GO; GO:0005675; C:transcription factor TFIIH holo complex; IBA:GO_Central.
DR GO; GO:0097550; C:transcription preinitiation complex; IBA:GO_Central.
DR GO; GO:0043138; F:3'-5' DNA helicase activity; IBA:GO_Central.
DR GO; GO:0005524; F:ATP binding; IEA:InterPro.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0016787; F:hydrolase activity; IEA:InterPro.
DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro.
DR GO; GO:0006367; P:transcription initiation at RNA polymerase II promoter; IBA:GO_Central.
DR CDD; cd18029; DEXHc_XPB; 1.
DR CDD; cd18789; SF2_C_XPB; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR InterPro; IPR032438; ERCC3_RAD25_C.
DR InterPro; IPR006935; Helicase/UvrB_N.
DR InterPro; IPR014001; Helicase_ATP-bd.
DR InterPro; IPR001650; Helicase_C.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR001161; XPB/Ssl2.
DR InterPro; IPR032830; XPB/Ssl2_N.
DR NCBIfam; TIGR00603; rad25; 1.
DR PANTHER; PTHR11274:SF0; GENERAL TRANSCRIPTION AND DNA REPAIR FACTOR IIH HELICASE SUBUNIT XPB; 1.
DR PANTHER; PTHR11274; RAD25/XP-B DNA REPAIR HELICASE; 1.
DR Pfam; PF16203; ERCC3_RAD25_C; 1.
DR Pfam; PF13625; Helicase_C_3; 1.
DR Pfam; PF04851; ResIII; 1.
DR PRINTS; PR00851; XRODRMPGMNTB.
DR SMART; SM00487; DEXDc; 1.
DR SMART; SM00490; HELICc; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 2.
DR PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR PROSITE; PS51194; HELICASE_CTER; 1.
PE 3: Inferred from homology;
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000009022}.
FT DOMAIN 251..412
FT /note="Helicase ATP-binding"
FT /evidence="ECO:0000259|PROSITE:PS51192"
FT DOMAIN 468..628
FT /note="Helicase C-terminal"
FT /evidence="ECO:0000259|PROSITE:PS51194"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:EDV26690.1"
SQ SEQUENCE 704 AA; 81130 MW; 959348A065FDE0BC CRC64;
DDYGAKDYRD VMQLKPDHRT RPLWVAPDGH IFLEAFSPVY KHAHDFLIAI SEPICRPEHV
HEYKLTPYSL YAAVSVGLQT EDIIEYLRRL SKASIPDGVI EFIKLCTVSY GKVKMVLKHN
RYYVESSHPE IIQMLLKDPV VQAARVKEGQ INDPSESDET LDPKEENIPS DIYDYLDKID
RDEEDIEITK TISFEINSDD VELVQRRCIE MEYPLLAEYD FRNDTVNPDI SIDLRPTTIL
RPYQEKSLRK MFGNGRARSG VIVLPCGAGK TLVGVTAACT VKKRCLVLCT SGVAVEQWKA
QFKLWSTIDE SLISRFTSDA KDKPSGCSVA ISTYSMVAHT TKRSWESERV MEYLQGQEWG
LMILDEVHTI PAKQFRRVLT VVHAHCKLGL TATLVREDDK IQDLNFLIGP KLYEANWMEL
QSLNFIARVQ CAEACVWCPM SPEFYREYLT TKTRKHMLFY VMNPNKFRAC QFLIKYHERR
NDKVIVFSDN VFGLKHYAIE LGKPYIYGPT AQKERLQILQ NFQHNPLVNC IFISKVGDNS
FDLPEANVLI QISSHGGSRR QEAQRLGRIL RAKKDSATEE YNAYFYSLVS QDTQEMYFSS
KRQRFLINQG YSFKVITKLS GMDDENLLYT EKKDQHQLLQ KVLAANETDA EEEKVAGDTY
STSSKSQVVR RTTSMASLSG ADDLVYLEYN KPKQRHPLFK KFRK
//