ID B3SUE2_SALSA Unreviewed; 304 AA.
AC B3SUE2;
DT 02-SEP-2008, integrated into UniProtKB/TrEMBL.
DT 02-SEP-2008, sequence version 1.
DT 27-MAR-2024, entry version 62.
DE SubName: Full=Homeobox protein HoxB13aa {ECO:0000313|EMBL:ABV82059.1, ECO:0000313|RefSeq:NP_001133045.1};
GN Name=HoxB13aa {ECO:0000313|EMBL:ABV82059.1};
GN Synonyms=hoxb13aa {ECO:0000313|RefSeq:NP_001133045.1};
OS Salmo salar (Atlantic salmon).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes;
OC Salmonidae; Salmoninae; Salmo.
OX NCBI_TaxID=8030 {ECO:0000313|EMBL:ABV82059.1};
RN [1] {ECO:0000313|EMBL:ABV82059.1, ECO:0000313|RefSeq:NP_001133045.1}
RP NUCLEOTIDE SEQUENCE.
RX PubMed=18424774; DOI=10.1093/molbev/msn097;
RA Mungpakdee S., Seo H.C., Angotzi A.R., Dong X., Akalin A., Chourrout D.;
RT "Differential evolution of the 13 Atlantic salmon Hox clusters.";
RL Mol. Biol. Evol. 25:1333-1343(2008).
RN [2] {ECO:0000313|RefSeq:NP_001133045.1}
RP IDENTIFICATION.
RG RefSeq;
RL Submitted (NOV-2023) to UniProtKB.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123,
CC ECO:0000256|PROSITE-ProRule:PRU00108, ECO:0000256|RuleBase:RU000682}.
CC -!- SIMILARITY: Belongs to the Abd-B homeobox family.
CC {ECO:0000256|ARBA:ARBA00006317}.
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DR EMBL; EF695324; ABV82059.1; -; mRNA.
DR RefSeq; NP_001133045.1; NM_001139573.1.
DR STRING; 8030.ENSSSAP00000009023; -.
DR PaxDb; 8030-ENSSSAP00000009023; -.
DR Ensembl; ENSSSAT00000009643; ENSSSAP00000009023; ENSSSAG00000004515.
DR GeneID; 100194483; -.
DR KEGG; sasa:100194483; -.
DR CTD; 100194483; -.
DR OMA; QHDGGSF; -.
DR OrthoDB; 728401at2759; -.
DR Proteomes; UP000087266; Chromosome ssa03.
DR Bgee; ENSSSAG00000004515; Expressed in muscle tissue and 3 other cell types or tissues.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0000981; F:DNA-binding transcription factor activity, RNA polymerase II-specific; IEA:InterPro.
DR CDD; cd00086; homeodomain; 1.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR017970; Homeobox_CS.
DR InterPro; IPR001356; Homeobox_dom.
DR InterPro; IPR022067; HoxA13_N.
DR PANTHER; PTHR45804:SF6; HOMEOBOX PROTEIN HOX-B13; 1.
DR PANTHER; PTHR45804; SEGMENTATION PROTEIN FUSHI TARAZU-LIKE PROTEIN; 1.
DR Pfam; PF00046; Homeodomain; 1.
DR Pfam; PF12284; HoxA13_N; 1.
DR SMART; SM00389; HOX; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR PROSITE; PS00027; HOMEOBOX_1; 1.
DR PROSITE; PS50071; HOMEOBOX_2; 1.
PE 2: Evidence at transcript level;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125, ECO:0000256|PROSITE-
KW ProRule:PRU00108};
KW Homeobox {ECO:0000256|ARBA:ARBA00023155, ECO:0000256|PROSITE-
KW ProRule:PRU00108};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242, ECO:0000256|PROSITE-
KW ProRule:PRU00108}; Reference proteome {ECO:0000313|Proteomes:UP000087266}.
FT DOMAIN 235..295
FT /note="Homeobox"
FT /evidence="ECO:0000259|PROSITE:PS50071"
FT DNA_BIND 237..296
FT /note="Homeobox"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00108"
SQ SEQUENCE 304 AA; 33625 MW; ED9A8EC6B9E6A48A CRC64;
MTTSLVLNPR WADTVMFVYE NNLDELNKNM EGLVGSGNFA ANQCRNLMAH SALGGHPSSL
VHSSGYSAVD VSGSSSGEPG KQCTPCPAVP QGSSTGPLPY GYFGNGYYPC RMGRGSLKSC
TQPSALSYSA EKYMDTPVTS EEYPSRAKEF AFYHGYPSPY QSMASYLDVS VVQTLGAGEP
RHDTLLPMDS YQPWALTNGW GGQMYCSKDQ SQAGHLWKSA LADVVAHQHD GNSFRRGRKK
RIPYTKVQLK ELEKEYAANK FITKDKRRKI SAGTNLSERQ ITIWFQNRRV KEKKFVAKVK
TSAP
//