ID RL6_LACCB Reviewed; 176 AA.
AC B3WAK3;
DT 14-APR-2009, integrated into UniProtKB/Swiss-Prot.
DT 02-SEP-2008, sequence version 1.
DT 01-MAY-2013, entry version 35.
DE RecName: Full=50S ribosomal protein L6;
GN Name=rplF; OrderedLocusNames=LCABL_26560;
OS Lactobacillus casei (strain BL23).
OC Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae;
OC Lactobacillus.
OX NCBI_TaxID=543734;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=BL23;
RA Maze A., Boel G., Bourand A., Loux V., Gibrat J.F., Zuniga M.,
RA Hartke A., Deutscher J.;
RT "Lactobacillus casei BL23 complete genome sequence.";
RL Submitted (JUN-2008) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: This protein binds to the 23S rRNA, and is important in
CC its secondary structure. It is located near the subunit interface
CC in the base of the L7/L12 stalk, and near the tRNA binding site of
CC the peptidyltransferase center (By similarity).
CC -!- SUBUNIT: Part of the 50S ribosomal subunit (By similarity).
CC -!- SIMILARITY: Belongs to the ribosomal protein L6P family.
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DR EMBL; FM177140; CAQ67722.1; -; Genomic_DNA.
DR RefSeq; YP_001988580.1; NC_010999.1.
DR ProteinModelPortal; B3WAK3; -.
DR SMR; B3WAK3; 9-168.
DR STRING; 543734.LCABL_26560; -.
DR EnsemblBacteria; CAQ67722; CAQ67722; LCABL_26560.
DR GeneID; 6406749; -.
DR KEGG; lcb:LCABL_26560; -.
DR PATRIC; 22214730; VBILacCas89204_2537.
DR eggNOG; COG0097; -.
DR HOGENOM; HOG000039903; -.
DR KO; K02933; -.
DR OMA; INNMVVG; -.
DR ProtClustDB; PRK05498; -.
DR GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR GO; GO:0019843; F:rRNA binding; IEA:HAMAP.
DR GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR GO; GO:0006412; P:translation; IEA:HAMAP.
DR Gene3D; 3.90.930.12; -; 2.
DR HAMAP; MF_01365_B; Ribosomal_L6_B; 1; -.
DR InterPro; IPR000702; Ribosomal_L6.
DR InterPro; IPR020040; Ribosomal_L6_a/b-dom.
DR InterPro; IPR019906; Ribosomal_L6_bac-type.
DR InterPro; IPR002358; Ribosomal_L6_CS.
DR PANTHER; PTHR11655; PTHR11655; 1.
DR PANTHER; PTHR11655:SF6; PTHR11655:SF6; 1.
DR Pfam; PF00347; Ribosomal_L6; 2.
DR PIRSF; PIRSF002162; Ribosomal_L6; 1.
DR PRINTS; PR00059; RIBOSOMALL6.
DR SUPFAM; SSF56053; Ribosomal_L6; 2.
DR TIGRFAMs; TIGR03654; L6_bact; 1.
DR PROSITE; PS00525; RIBOSOMAL_L6_1; 1.
PE 3: Inferred from homology;
KW Complete proteome; Ribonucleoprotein; Ribosomal protein; RNA-binding;
KW rRNA-binding.
FT CHAIN 1 176 50S ribosomal protein L6.
FT /FTId=PRO_1000144005.
SQ SEQUENCE 176 AA; 19334 MW; 7C707037D2E0BDEC CRC64;
MSRIGYKVIK VPAGVTITKD GDNITVKGPK GELTRHFAPE IEMHQEGDEI NFTRPDDSYK
AVHGTMRANL NNMVVGVTEG YKKEMKLVGV GYRAQKQGEK LVLNVGYSHP VEMTAPKGVT
VEVPSTTQII ISGISKQVVG QFAAVVRSVR APEPYKGKGI RYVDEHVRRK EGKTGK
//
