GenomeNet

Database: UniProt
Entry: B4UTY7_BP163
LinkDB: B4UTY7_BP163
Original site: B4UTY7_BP163 
ID   B4UTY7_BP163            Unreviewed;        69 AA.
AC   B4UTY7;
DT   23-SEP-2008, integrated into UniProtKB/TrEMBL.
DT   23-SEP-2008, sequence version 1.
DT   28-JUN-2023, entry version 39.
DE   SubName: Full=p099 {ECO:0000313|EMBL:ABF71346.1};
GN   Name=16-3p099 {ECO:0000313|EMBL:ABF71346.1};
GN   ORFNames=RM163_099 {ECO:0000313|EMBL:ABF71346.1};
OS   Rhizobium phage 16-3 (Bacteriophage 16-3).
OC   Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes.
OX   NCBI_TaxID=10704 {ECO:0000313|EMBL:ABF71346.1, ECO:0000313|Proteomes:UP000001729};
OH   NCBI_TaxID=382; Rhizobium meliloti (Ensifer meliloti) (Sinorhizobium meliloti).
RN   [1] {ECO:0000313|EMBL:ABF71346.1, ECO:0000313|Proteomes:UP000001729}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RA   Dallmann G., Papp P.P., Orosz L.;
RT   "Related repressor specificity of unrelated phages.";
RL   Nature 330:398-401(1987).
RN   [2] {ECO:0000313|EMBL:ABF71346.1, ECO:0000313|Proteomes:UP000001729}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX   PubMed=7689141; DOI=10.1007/BF00277064;
RA   Papp I., Dorgai L., Papp P., Jonas E., Olasz F., Orosz L.;
RT   "The bacterial attachment site of the temperate Rhizobium phage 16-3
RT   overlaps the 3' end of a putative proline tRNA gene.";
RL   Mol. Gen. Genet. 240:258-264(1993).
RN   [3] {ECO:0000313|EMBL:ABF71346.1, ECO:0000313|Proteomes:UP000001729}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX   PubMed=8386836; DOI=10.1093/nar/21.7.1671;
RA   Dorgai L., Papp I., Papp P., Kalman M., Orosz L.;
RT   "Nucleotide sequences of the sites involved in the integration of phage 16-
RT   3 of Rhizobium meliloti 41.";
RL   Nucleic Acids Res. 21:1671-1671(1993).
RN   [4] {ECO:0000313|EMBL:ABF71346.1, ECO:0000313|Proteomes:UP000001729}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX   PubMed=10400574;
RA   Semsey S., Papp I., Buzas Z., Patthy A., Orosz L., Papp P.P.;
RT   "Identification of site-specific recombination genes int and xis of the
RT   Rhizobium temperate phage 16-3.";
RL   J. Bacteriol. 181:4185-4192(1999).
RN   [5] {ECO:0000313|EMBL:ABF71346.1, ECO:0000313|Proteomes:UP000001729}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX   PubMed=11741858; DOI=10.1128/JB.184.1.177-182.2002;
RA   Semsey S., Blaha B., Koles K., Orosz L., Papp P.P.;
RT   "Site-specific integrative elements of rhizobiophage 16-3 can integrate
RT   into proline tRNA (CGG) genes in different bacterial genera.";
RL   J. Bacteriol. 184:177-182(2002).
RN   [6] {ECO:0000313|EMBL:ABF71346.1, ECO:0000313|Proteomes:UP000001729}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX   PubMed=12084925; DOI=10.1073/pnas.132275399;
RA   Papp P.P., Nagy T., Ferenczi S., Elo P., Csiszovszki Z., Buzas Z.,
RA   Patthy A., Orosz L.;
RT   "Binding sites of different geometries for the 16-3 phage repressor.";
RL   Proc. Natl. Acad. Sci. U.S.A. 99:8790-8795(2002).
RN   [7] {ECO:0000313|EMBL:ABF71346.1, ECO:0000313|Proteomes:UP000001729}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX   PubMed=12867446; DOI=10.1128/JB.185.15.4382-4392.2003;
RA   Csiszovszki Z., Buzas Z., Semsey S., Ponyi T., Papp P.P., Orosz L.;
RT   "immX immunity region of rhizobium phage 16-3: two overlapping cistrons of
RT   repressor function.";
RL   J. Bacteriol. 185:4382-4392(2003).
RN   [8] {ECO:0000313|EMBL:ABF71346.1, ECO:0000313|Proteomes:UP000001729}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX   PubMed=14996788; DOI=10.1128/JB.186.6.1591-1597.2004;
RA   Putnoky P., Deak V., Bekasi K., Palvolgyi A., Maasz A., Palagyi Z.,
RA   Hoffmann G., Kerepesi I.;
RT   "H protein of bacteriophage 16-3 and RkpM protein of Sinorhizobium meliloti
RT   41 are involved in phage adsorption.";
RL   J. Bacteriol. 186:1591-1597(2004).
RN   [9] {ECO:0000313|EMBL:ABF71346.1, ECO:0000313|Proteomes:UP000001729}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX   PubMed=15774897; DOI=10.1128/JB.187.7.2526-2531.2005;
RA   Ganyu A., Csiszovszki Z., Ponyi T., Kern A., Buzas Z., Orosz L., Papp P.P.;
RT   "Identification of cohesive ends and genes encoding the terminase of phage
RT   16-3.";
RL   J. Bacteriol. 187:2526-2531(2005).
RN   [10] {ECO:0000313|Proteomes:UP000001729}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RA   Papp P.P.;
RL   Submitted (APR-2006) to the EMBL/GenBank/DDBJ databases.
RN   [11] {ECO:0000313|EMBL:ABF71346.1, ECO:0000313|Proteomes:UP000001729}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX   PubMed=20081029; DOI=10.1128/JB.01335-09;
RA   Deak V., Lukacs R., Buzas Z., Palvolgyi A., Papp P., Orosz L., Putnoky P.;
RT   "Identification of tail genes in the temperate phage 16-3 of Sinorhizobium
RT   meliloti 41.";
RL   J. Bacteriol. 192:1617-1623(2010).
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; DQ500118; ABF71346.1; -; Genomic_DNA.
DR   RefSeq; YP_002117657.1; NC_011103.1.
DR   GeneID; 6653990; -.
DR   KEGG; vg:6653990; -.
DR   OrthoDB; 41590at10239; -.
DR   Proteomes; UP000001729; Genome.
DR   GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR   CDD; cd00093; HTH_XRE; 1.
DR   Gene3D; 1.10.260.40; lambda repressor-like DNA-binding domains; 1.
DR   InterPro; IPR001387; Cro/C1-type_HTH.
DR   InterPro; IPR010982; Lambda_DNA-bd_dom_sf.
DR   Pfam; PF13560; HTH_31; 1.
DR   SUPFAM; SSF47413; lambda repressor-like DNA-binding domains; 1.
DR   PROSITE; PS50943; HTH_CROC1; 1.
PE   4: Predicted;
KW   Reference proteome {ECO:0000313|Proteomes:UP000001729}.
FT   DOMAIN          6..64
FT                   /note="HTH cro/C1-type"
FT                   /evidence="ECO:0000259|PROSITE:PS50943"
SQ   SEQUENCE   69 AA;  8039 MW;  DFC2AFB052656820 CRC64;
     MDNDEFRAIR KRLGLTQAQL ATVLGYPHVM QVSEIERETN PKPVPRHVAM LMRAYDEGYR
     PKDWPRSDG
//
DBGET integrated database retrieval system