ID B5CKP3_9FIRM Unreviewed; 428 AA.
AC B5CKP3;
DT 14-OCT-2008, integrated into UniProtKB/TrEMBL.
DT 14-OCT-2008, sequence version 1.
DT 24-JAN-2024, entry version 41.
DE SubName: Full=Transposase, IS116/IS110/IS902 family {ECO:0000313|EMBL:EDY34109.1};
GN ORFNames=RUMLAC_00007 {ECO:0000313|EMBL:EDY34109.1};
OS [Ruminococcus] lactaris ATCC 29176.
OC Bacteria; Bacillota; Clostridia; Eubacteriales; Lachnospiraceae;
OC Mediterraneibacter.
OX NCBI_TaxID=471875 {ECO:0000313|EMBL:EDY34109.1, ECO:0000313|Proteomes:UP000003254};
RN [1] {ECO:0000313|EMBL:EDY34109.1, ECO:0000313|Proteomes:UP000003254}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 29176 {ECO:0000313|EMBL:EDY34109.1,
RC ECO:0000313|Proteomes:UP000003254};
RA Sudarsanam P., Ley R., Guruge J., Turnbaugh P.J., Mahowald M., Liep D.,
RA Gordon J.;
RT "Draft genome sequence of Ruminococcus lactaris ATCC 29176.";
RL Submitted (AUG-2008) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:EDY34109.1, ECO:0000313|Proteomes:UP000003254}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 29176 {ECO:0000313|EMBL:EDY34109.1,
RC ECO:0000313|Proteomes:UP000003254};
RA Fulton L., Clifton S., Fulton B., Xu J., Minx P., Pepin K.H., Johnson M.,
RA Bhonagiri V., Nash W.E., Mardis E.R., Wilson R.K.;
RL Submitted (AUG-2008) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EDY34109.1}.
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DR EMBL; ABOU02000002; EDY34109.1; -; Genomic_DNA.
DR RefSeq; WP_005609426.1; NZ_DS990173.1.
DR AlphaFoldDB; B5CKP3; -.
DR GeneID; 77335151; -.
DR eggNOG; COG3547; Bacteria.
DR HOGENOM; CLU_036902_4_1_9; -.
DR Proteomes; UP000003254; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0004803; F:transposase activity; IEA:InterPro.
DR GO; GO:0006313; P:DNA transposition; IEA:InterPro.
DR InterPro; IPR002525; Transp_IS110-like_N.
DR InterPro; IPR047650; Transpos_IS110.
DR InterPro; IPR003346; Transposase_20.
DR NCBIfam; NF033542; transpos_IS110; 1.
DR PANTHER; PTHR33055; TRANSPOSASE FOR INSERTION SEQUENCE ELEMENT IS1111A; 1.
DR Pfam; PF01548; DEDD_Tnp_IS110; 1.
DR Pfam; PF02371; Transposase_20; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000003254}.
FT DOMAIN 20..181
FT /note="Transposase IS110-like N-terminal"
FT /evidence="ECO:0000259|Pfam:PF01548"
FT DOMAIN 290..373
FT /note="Transposase IS116/IS110/IS902 C-terminal"
FT /evidence="ECO:0000259|Pfam:PF02371"
FT REGION 103..126
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 106..126
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 428 AA; 48666 MW; 4DA81541C4098E84 CRC64;
MNCNTQNAKI ASITEKTLIV GIDVGSETHY ARAFDWRNYE YSKKPLEFSN TEAGFMTFKA
WVEDIAEKQG KTAVIPGMEP TGHYWFALGK FLQDSGMKPV HVNPHHVKKS KELDDNNPNK
NERKDPKTIA ALVNEGRFSY PYIPTGIYVE IRSLSNLRFQ TQEELTRIKN RIARWFSIYF
PEYKDVYGDL MAVSGRMILK EAPLPEDISK LGVDGVNQIW RNVKLRGIGM KRAKTLVSAA
EHSVGSKEAP EAARIELMNL LNDVDVYASR LEELLRNIED KLMTIPYVDK LMEIKGIGLV
TVSGFIAEVG DIGRFDNPKQ LQKLAGYAIV ANDSGKHNGE SRISYRGRKR LRYVLYEAAI
SLVGKNAEFK AIHEYYRTRK ENPLKKMQSV VAVACKIIRV FYTILTKGVD YDPMKLMSDI
RRPQLQAA
//