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Database: UniProt
Entry: B5CMC1_9FIRM
LinkDB: B5CMC1_9FIRM
Original site: B5CMC1_9FIRM 
ID   B5CMC1_9FIRM            Unreviewed;      1535 AA.
AC   B5CMC1;
DT   14-OCT-2008, integrated into UniProtKB/TrEMBL.
DT   14-OCT-2008, sequence version 1.
DT   24-JAN-2024, entry version 57.
DE   SubName: Full=Carbohydrate binding domain protein {ECO:0000313|EMBL:EDY33586.1};
GN   ORFNames=RUMLAC_00596 {ECO:0000313|EMBL:EDY33586.1};
OS   [Ruminococcus] lactaris ATCC 29176.
OC   Bacteria; Bacillota; Clostridia; Eubacteriales; Lachnospiraceae;
OC   Mediterraneibacter.
OX   NCBI_TaxID=471875 {ECO:0000313|EMBL:EDY33586.1, ECO:0000313|Proteomes:UP000003254};
RN   [1] {ECO:0000313|EMBL:EDY33586.1, ECO:0000313|Proteomes:UP000003254}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 29176 {ECO:0000313|EMBL:EDY33586.1,
RC   ECO:0000313|Proteomes:UP000003254};
RA   Sudarsanam P., Ley R., Guruge J., Turnbaugh P.J., Mahowald M., Liep D.,
RA   Gordon J.;
RT   "Draft genome sequence of Ruminococcus lactaris ATCC 29176.";
RL   Submitted (AUG-2008) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EMBL:EDY33586.1, ECO:0000313|Proteomes:UP000003254}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 29176 {ECO:0000313|EMBL:EDY33586.1,
RC   ECO:0000313|Proteomes:UP000003254};
RA   Fulton L., Clifton S., Fulton B., Xu J., Minx P., Pepin K.H., Johnson M.,
RA   Bhonagiri V., Nash W.E., Mardis E.R., Wilson R.K.;
RL   Submitted (AUG-2008) to the EMBL/GenBank/DDBJ databases.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:EDY33586.1}.
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DR   EMBL; ABOU02000019; EDY33586.1; -; Genomic_DNA.
DR   RefSeq; WP_005610271.1; NZ_DS990183.1.
DR   GeneID; 77334967; -.
DR   eggNOG; COG0366; Bacteria.
DR   eggNOG; COG5492; Bacteria.
DR   HOGENOM; CLU_001559_0_0_9; -.
DR   Proteomes; UP000003254; Unassembled WGS sequence.
DR   GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR   GO; GO:0030246; F:carbohydrate binding; IEA:InterPro.
DR   GO; GO:0033926; F:glycopeptide alpha-N-acetylgalactosaminidase activity; IEA:InterPro.
DR   Gene3D; 2.70.98.10; -; 1.
DR   Gene3D; 1.20.1270.90; AF1782-like; 1.
DR   Gene3D; 2.60.120.260; Galactose-binding domain-like; 2.
DR   Gene3D; 3.20.20.80; Glycosidases; 1.
DR   Gene3D; 2.60.40.1180; Golgi alpha-mannosidase II; 1.
DR   Gene3D; 2.60.40.10; Immunoglobulins; 1.
DR   InterPro; IPR005102; Carbo-bd_X2.
DR   InterPro; IPR025706; Endoa_GalNAc.
DR   InterPro; IPR040633; Gal_mutarotas_3.
DR   InterPro; IPR014718; GH-type_carb-bd.
DR   InterPro; IPR049314; GH101_dom-5.
DR   InterPro; IPR040502; GH101_dom-6.
DR   InterPro; IPR035364; Glyco_hyd_101_beta.
DR   InterPro; IPR013780; Glyco_hydro_b.
DR   InterPro; IPR013783; Ig-like_fold.
DR   InterPro; IPR014756; Ig_E-set.
DR   InterPro; IPR001202; WW_dom.
DR   Pfam; PF03442; CBM_X2; 1.
DR   Pfam; PF18080; Gal_mutarotas_3; 1.
DR   Pfam; PF17974; GalBD_like; 1.
DR   Pfam; PF21466; GH101_dom-5; 1.
DR   Pfam; PF17451; Glyco_hyd_101C; 1.
DR   Pfam; PF12905; Glyco_hydro_101; 1.
DR   SUPFAM; SSF81296; E set domains; 1.
DR   PROSITE; PS50020; WW_DOMAIN_2; 1.
PE   4: Predicted;
KW   Membrane {ECO:0000256|SAM:Phobius};
KW   Reference proteome {ECO:0000313|Proteomes:UP000003254};
KW   Signal {ECO:0000256|ARBA:ARBA00022729};
KW   Transmembrane {ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM        1510..1529
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   DOMAIN          896..929
FT                   /note="WW"
FT                   /evidence="ECO:0000259|PROSITE:PS50020"
FT   REGION          805..831
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          1426..1510
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        1430..1446
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        1447..1465
FT                   /note="Pro residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        1466..1505
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   1535 AA;  168314 MW;  C24E9C95F7691757 CRC64;
     MIIDQTVDAF SDTMSGQIGM RVWGEPTETH GCALKFDNIK TSDIFSAVSI DPKSVKLEQD
     TAAAQDIEVA ITGENTLSAI KNGSEVLERG TDYTVNGQNV TIKTTYLEKI KSQSSTKLVF
     EFEDGQTQTF TININIPEPT VSYTRNFAAD GADGFTKKSG SGSMSLENGA MKLQGDGVFI
     DDNSASLKDQ EIEFTYDPMN DNCGYGAVLR YVSDNEYFYV GPSSQNNQHY TRWNIWNAQG
     QSLLGSEYND SGFILANRVV PYKIKVRIVD KYVTVFVDNE EILNRELSNV TTNPGKVGFR
     TGSNNGMLIQ KFTQENAAVP TVVENTEPVT IQSDAMTVRL DRAFPRVIDY TLKNGGETVK
     GQELALHQIE LNNKLYTPDV TADISENKAV YHVSEATTGI SFDVIFTVEG NVLSMNVKNI
     VDDQTKLYTL NFPRHSLISM SSKDADGKLT VNNYQGQNAI SLSSANASEA YNETTLAVLS
     NRNVAAALSG ESYKNRHEVA YQTFAAGDHN STGLWMNEYT YRGLDGEIMY LPAVKVAVTA
     DCNGDGKVDA QDGAIVLRDK CMTRKSGADE VTDSWTMIAM NVGSEAQYPF LRILDNVKKM
     YLATDGFGQN IIIKGYQGEG HDSSHPDYAN YNKHAGGLED FNTLLSEAEK YNAQIGIHVN
     QTDTYPEAPQ YGKLAASLPA WDWYDSSKGI IRENDDLDTS ENGLDGRFSQ LYDKDTQGKI
     DTTYVDVFFG TRWPMYKLIQ NIKGRNIILG TENPDEMVSH SVFVHGIQTG AGNFKGAGNL
     VRFVENNQSD IFQGTTLFRG IQSRNNGGDT GGASKGGAGI DGWQQSSQGN NAASMNDSLD
     TFYCEVLPAK FLAQYPLMQY ESESRAVLGN SNEVVTEIVN NVNVITLDGE KVAEGNKIFI
     PWEKDDDEQG KIYHYNKDGG SSTWTLPESW GNVTEVTIYK LSAEGKSDKK TLPVTGRKVT
     IDATAKTGYV LYKEDAVKVD TADTMEWSTG SPVKDMGFDS YNFDEWKPSS TSDSVDHIKI
     KDNSLGNAHL YIEGTKDGQV SQTLTGLVPG QAYSASVWCI TDDGRKASIE VKNGDEVVSN
     YMEQSNVTYG VHHNDKYLTK AQRMQVRFTA ASDTVKLTLS AAAGKSDTSV VDFDDVRVAK
     VDASTNPDPN KYTYWEDFEN VDQGFGVFVS TESDQSHLSQ KNPVNPEYTT DVIDGNYSLK
     IRAKDYMRTI PSTVRFKPNT EYKVGIEYKA PSANAFTFAV KSDKASKTLA SAVANAQSGK
     LVLEFTTGDE EDCYVDITGQ SSEYYVDNFY VEEAYIPADF SELQKAVDEA EKLDRTVYMT
     EYYAGLDKIL AEAEKVLDNP RTEQSEVDEM TQKVRDAINA LQPLATNADF AALEKAVEEA
     EKIIVKDYKD TSDFESALAA AKLLLEGKET KKELKHTEVA TATDTLVEKQ KALKPVDPKP
     VDPDPVDPKP VDPNPVDPDP VAPGKPSTPD NSNGAGQTTG SGKPSADQKN PAMGTKKSGK
     ATKTGDTTPV VPVAGGVLVS AMMLLANFLK KKKDN
//
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