ID B5JKR3_9BACT Unreviewed; 301 AA.
AC B5JKR3;
DT 14-OCT-2008, integrated into UniProtKB/TrEMBL.
DT 14-OCT-2008, sequence version 1.
DT 27-MAR-2024, entry version 76.
DE SubName: Full=Transcriptional regulator, AraC family protein {ECO:0000313|EMBL:EDY82889.1};
GN ORFNames=VDG1235_2512 {ECO:0000313|EMBL:EDY82889.1};
OS Verrucomicrobiae bacterium DG1235.
OC Bacteria; Verrucomicrobiota; Verrucomicrobiae.
OX NCBI_TaxID=382464 {ECO:0000313|EMBL:EDY82889.1, ECO:0000313|Proteomes:UP000003839};
RN [1] {ECO:0000313|EMBL:EDY82889.1, ECO:0000313|Proteomes:UP000003839}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DG1235 {ECO:0000313|EMBL:EDY82889.1,
RC ECO:0000313|Proteomes:UP000003839};
RA Hart M., Ferriera S., Johnson J., Kravitz S., Beeson K., Sutton G.,
RA Rogers Y.-H., Friedman R., Frazier M., Venter J.C.;
RL Submitted (JUL-2008) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; DS990592; EDY82889.1; -; Genomic_DNA.
DR AlphaFoldDB; B5JKR3; -.
DR STRING; 382464.VDG1235_2512; -.
DR eggNOG; COG2207; Bacteria.
DR HOGENOM; CLU_000445_88_6_0; -.
DR OrthoDB; 9807321at2; -.
DR Proteomes; UP000003839; Unassembled WGS sequence.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR CDD; cd06986; cupin_MmsR-like_N; 1.
DR Gene3D; 1.10.10.60; Homeodomain-like; 2.
DR Gene3D; 2.60.120.280; Regulatory protein AraC; 1.
DR InterPro; IPR003313; AraC-bd.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR037923; HTH-like.
DR InterPro; IPR018060; HTH_AraC.
DR InterPro; IPR018062; HTH_AraC-typ_CS.
DR InterPro; IPR020449; Tscrpt_reg_HTH_AraC-type.
DR PANTHER; PTHR46796:SF2; HTH-TYPE TRANSCRIPTIONAL ACTIVATOR RHAS; 1.
DR PANTHER; PTHR46796; HTH-TYPE TRANSCRIPTIONAL ACTIVATOR RHAS-RELATED; 1.
DR Pfam; PF02311; AraC_binding; 1.
DR Pfam; PF12833; HTH_18; 1.
DR PRINTS; PR00032; HTHARAC.
DR SMART; SM00342; HTH_ARAC; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 2.
DR SUPFAM; SSF51215; Regulatory protein AraC; 1.
DR PROSITE; PS00041; HTH_ARAC_FAMILY_1; 1.
DR PROSITE; PS01124; HTH_ARAC_FAMILY_2; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Reference proteome {ECO:0000313|Proteomes:UP000003839};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 193..291
FT /note="HTH araC/xylS-type"
FT /evidence="ECO:0000259|PROSITE:PS01124"
SQ SEQUENCE 301 AA; 33985 MW; 933034957101A7EF CRC64;
MIPLDEGFPS QTLVRMPVET VSCLQQLPFC RSLYAADIGH YPEARNHLVK RDQGCPNHIL
IYCIGGQGWY SLNGEKRIPV QAGQAILIPA KSPHAYGSTE GQSWRLYWIH FSGTEADGLF
NFLSDERTNA LIYLPHHASI ITAFEDAIRW TQREHSKSVL HAFAGSCSRL LGIIAEGKRP
NSSRARFVEE RVRSTITRMR ETLRSPLSLE QLASEACLSV PHYSALFKKQ TSSSPIQMYS
QMRIQLACEL LHNTDLGIKE VAETAGYEDA YYFSRAFKKV MGCPPSAYRN SLDKRQRDPS
E
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