ID B5X9V6_SALSA Unreviewed; 122 AA.
AC B5X9V6;
DT 25-NOV-2008, integrated into UniProtKB/TrEMBL.
DT 25-NOV-2008, sequence version 1.
DT 27-MAR-2024, entry version 52.
DE SubName: Full=Gamma-aminobutyric acid receptor-associated protein {ECO:0000313|EMBL:ACI67626.1, ECO:0000313|RefSeq:XP_014011175.1};
GN Name=GBRAP {ECO:0000313|EMBL:ACI67626.1};
GN Synonyms=LOC106577557 {ECO:0000313|RefSeq:XP_014011175.1};
OS Salmo salar (Atlantic salmon).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes;
OC Salmonidae; Salmoninae; Salmo.
OX NCBI_TaxID=8030 {ECO:0000313|EMBL:ACI67626.1};
RN [1] {ECO:0000313|EMBL:ACI67967.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Thyroid {ECO:0000313|EMBL:ACI67967.1};
RG cGRASP (B.F. Koop & W.S. Davidson);
RA Leong J., von Schalburg K., Cooper G., Moore R., Holt R., Davidson W.S.,
RA Koop B.F.;
RT "Salmo salar full-length cDNAs.";
RL Submitted (OCT-2008) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:ACI67626.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Thyroid {ECO:0000313|EMBL:ACI67626.1};
RG cGRASP (B.F. Koop & W.S. Davidson);
RA Leong J., von Schalburg K., Cooper G., Moore R., Holt R., Davidson W.S.,
RA Koop B.F.;
RL Submitted (OCT-2008) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EMBL:ACI67626.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Spleen {ECO:0000313|EMBL:ADM15972.1}, and Thyroid
RC {ECO:0000313|EMBL:ACI67626.1};
RX PubMed=20433749; DOI=10.1186/1471-2164-11-279;
RA Leong J.S., Jantzen S.G., von Schalburg K.R., Cooper G.A., Messmer A.M.,
RA Liao N.Y., Munro S., Moore R., Holt R.A., Jones S.J., Davidson W.S.,
RA Koop B.F.;
RT "Salmo salar and Esox lucius full-length cDNA sequences reveal changes in
RT evolutionary pressures on a post-tetraploidization genome.";
RL BMC Genomics 11:279-279(2010).
RN [4] {ECO:0000313|EMBL:ACI67626.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Spleen {ECO:0000313|EMBL:ADM15972.1}, and Thyroid
RC {ECO:0000313|EMBL:ACI67626.1};
RG cGRASP (B.F. Koop & W.S. Davidson);
RL Submitted (AUG-2010) to the EMBL/GenBank/DDBJ databases.
RN [5] {ECO:0000313|RefSeq:XP_014011175.1}
RP IDENTIFICATION.
RC TISSUE=Muscle {ECO:0000313|RefSeq:XP_014011175.1};
RG RefSeq;
RL Submitted (NOV-2023) to UniProtKB.
CC -!- SIMILARITY: Belongs to the ATG8 family. {ECO:0000256|ARBA:ARBA00007293,
CC ECO:0000256|RuleBase:RU004384}.
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DR EMBL; BT047825; ACI67626.1; -; mRNA.
DR EMBL; BT048166; ACI67967.1; -; mRNA.
DR EMBL; BT125231; ADM15972.1; -; mRNA.
DR RefSeq; XP_014011175.1; XM_014155700.1.
DR STRING; 8030.ENSSSAP00000118693; -.
DR PaxDb; 8030-ENSSSAP00000118693; -.
DR Ensembl; ENSSSAT00000153973; ENSSSAP00000118696; ENSSSAG00000080913.
DR GeneID; 106577557; -.
DR KEGG; sasa:106577557; -.
DR OrthoDB; 652940at2759; -.
DR Proteomes; UP000087266; Chromosome ssa18.
DR Bgee; ENSSSAG00000080913; Expressed in spleen and 16 other cell types or tissues.
DR GO; GO:0006914; P:autophagy; IEA:UniProtKB-KW.
DR CDD; cd17232; Ubl_ATG8_GABARAP; 1.
DR InterPro; IPR004241; Atg8-like.
DR InterPro; IPR029071; Ubiquitin-like_domsf.
DR PANTHER; PTHR10969:SF33; GAMMA-AMINOBUTYRIC ACID RECEPTOR-ASSOCIATED PROTEIN; 1.
DR PANTHER; PTHR10969; MICROTUBULE-ASSOCIATED PROTEINS 1A/1B LIGHT CHAIN 3-RELATED; 1.
DR Pfam; PF02991; ATG8; 1.
DR SUPFAM; SSF54236; Ubiquitin-like; 1.
PE 2: Evidence at transcript level;
KW Autophagy {ECO:0000256|RuleBase:RU004384};
KW Lipoprotein {ECO:0000256|PIRSR:PIRSR604241-50};
KW Membrane {ECO:0000256|ARBA:ARBA00023136};
KW Receptor {ECO:0000313|EMBL:ACI67626.1, ECO:0000313|RefSeq:XP_014011175.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000087266}.
FT LIPID 116
FT /note="Phosphatidylserine amidated glycine; alternate"
FT /evidence="ECO:0000256|PIRSR:PIRSR604241-50"
SQ SEQUENCE 122 AA; 14520 MW; EF3261E5DDED581C CRC64;
MKFQYKEEHP FEKRRSEGEK IRKKYPDRVP VIVEKAPKAR IGDLDKKKYL VPSDLTVGQF
YFLIRKRIHL RAEDALFFFV NNVIPPTSAT MGLLYQEHHE EDFFLYIAYS DESVYGDNQT
EI
//
