ID B5XCQ6_SALSA Unreviewed; 388 AA.
AC B5XCQ6;
DT 25-NOV-2008, integrated into UniProtKB/TrEMBL.
DT 25-NOV-2008, sequence version 1.
DT 27-MAR-2024, entry version 60.
DE SubName: Full=F-box/WD repeat-containing protein 4 {ECO:0000313|EMBL:ACI68626.1, ECO:0000313|RefSeq:XP_014009479.1};
GN Name=FBXW4 {ECO:0000313|EMBL:ACI68626.1};
GN Synonyms=fbxw4 {ECO:0000313|RefSeq:XP_014009479.1};
OS Salmo salar (Atlantic salmon).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes;
OC Salmonidae; Salmoninae; Salmo.
OX NCBI_TaxID=8030 {ECO:0000313|EMBL:ACI68626.1};
RN [1] {ECO:0000313|EMBL:ACI68626.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Spleen {ECO:0000313|EMBL:ACI68626.1};
RG cGRASP (B.F. Koop & W.S. Davidson);
RA Leong J., von Schalburg K., Cooper G., Moore R., Holt R., Davidson W.S.,
RA Koop B.F.;
RL Submitted (OCT-2008) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:ACI68626.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Spleen {ECO:0000313|EMBL:ACI68626.1};
RX PubMed=20433749; DOI=10.1186/1471-2164-11-279;
RA Leong J.S., Jantzen S.G., von Schalburg K.R., Cooper G.A., Messmer A.M.,
RA Liao N.Y., Munro S., Moore R., Holt R.A., Jones S.J., Davidson W.S.,
RA Koop B.F.;
RT "Salmo salar and Esox lucius full-length cDNA sequences reveal changes in
RT evolutionary pressures on a post-tetraploidization genome.";
RL BMC Genomics 11:279-279(2010).
RN [3] {ECO:0000313|EMBL:ACI68626.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Spleen {ECO:0000313|EMBL:ACI68626.1};
RG cGRASP (B.F. Koop & W.S. Davidson);
RL Submitted (AUG-2010) to the EMBL/GenBank/DDBJ databases.
RN [4] {ECO:0000313|RefSeq:XP_014009479.1}
RP IDENTIFICATION.
RC TISSUE=Muscle {ECO:0000313|RefSeq:XP_014009479.1};
RG RefSeq;
RL Submitted (NOV-2023) to UniProtKB.
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DR EMBL; BT048825; ACI68626.1; -; mRNA.
DR RefSeq; XP_014009479.1; XM_014154004.1.
DR STRING; 8030.ENSSSAP00000087733; -.
DR PaxDb; 8030-ENSSSAP00000087733; -.
DR GeneID; 106576695; -.
DR KEGG; sasa:106576695; -.
DR CTD; 6468; -.
DR OMA; ITEQRMH; -.
DR OrthoDB; 51407at2759; -.
DR Proteomes; UP000087266; Chromosome ssa18.
DR Bgee; ENSSSAG00000069868; Expressed in zone of skin and 15 other cell types or tissues.
DR Gene3D; 1.20.1280.50; -; 1.
DR Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 1.
DR InterPro; IPR036047; F-box-like_dom_sf.
DR InterPro; IPR001810; F-box_dom.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR InterPro; IPR036322; WD40_repeat_dom_sf.
DR InterPro; IPR001680; WD40_rpt.
DR PANTHER; PTHR14381; DACTYLIN; 1.
DR PANTHER; PTHR14381:SF1; F-BOX_WD REPEAT-CONTAINING PROTEIN 4; 1.
DR Pfam; PF12937; F-box-like; 1.
DR Pfam; PF00400; WD40; 2.
DR SMART; SM00256; FBOX; 1.
DR SMART; SM00320; WD40; 5.
DR SUPFAM; SSF81383; F-box domain; 1.
DR SUPFAM; SSF50978; WD40 repeat-like; 1.
DR PROSITE; PS50181; FBOX; 1.
DR PROSITE; PS50082; WD_REPEATS_2; 1.
PE 2: Evidence at transcript level;
KW Reference proteome {ECO:0000313|Proteomes:UP000087266};
KW WD repeat {ECO:0000256|PROSITE-ProRule:PRU00221}.
FT DOMAIN 1..46
FT /note="F-box"
FT /evidence="ECO:0000259|PROSITE:PS50181"
FT REPEAT 173..212
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
SQ SEQUENCE 388 AA; 44340 MW; 02CC71C99411BF3E CRC64;
MFLFQLPEVV LYHIMSYLEY KSLSRLSQVC KTIYHFANRD AVWRKIAKEF INTGITRQGA
DVYPHIPLKD RVKVSQNWCH GICRKEVMLK WRINLLPWIQ LDGDVLYLSQ AADIGAYHLR
PDTGKLQRSP MALFSGHLED VCRFAVTDTH LVSGGSDGKI LVHHRRNGFS MEYSGHNQEV
NCLDCRGGLI VSGSRDRTAR IWTFSSNCPR DTIPMNDRVW SVAISPTQSS FVTGTACCAN
FSPLRIWDVE RCELLCCLGS EFRRGAGVLD IVYESPVQLL TCGYDTYIRS WDLRLSPRKC
VMEWEEPHDS ALYCIQTDGN HMIASGSSYY GVIRTWDKRQ TRCLEMFQLS SAVSSPVYCL
RFNTSHLYAA LATALHSLDF KQGPRPRR
//
