ID B5YLG3_THAPS Unreviewed; 508 AA.
AC B5YLG3;
DT 25-NOV-2008, integrated into UniProtKB/TrEMBL.
DT 25-NOV-2008, sequence version 1.
DT 24-JAN-2024, entry version 52.
DE RecName: Full=Amine oxidase domain-containing protein {ECO:0000259|Pfam:PF01593};
DE Flags: Fragment;
GN ORFNames=THAPS_38189 {ECO:0000313|EMBL:ACI64077.1};
OS Thalassiosira pseudonana (Marine diatom) (Cyclotella nana).
OC Eukaryota; Sar; Stramenopiles; Ochrophyta; Bacillariophyta;
OC Coscinodiscophyceae; Thalassiosirophycidae; Thalassiosirales;
OC Thalassiosiraceae; Thalassiosira.
OX NCBI_TaxID=35128 {ECO:0000313|EMBL:ACI64077.1, ECO:0000313|Proteomes:UP000001449};
RN [1] {ECO:0000313|EMBL:ACI64077.1, ECO:0000313|Proteomes:UP000001449}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CCMP1335 {ECO:0000313|EMBL:ACI64077.1};
RX PubMed=15459382; DOI=10.1126/science.1101156;
RA Armbrust E.V., Berges J.A., Bowler C., Green B.R., Martinez D.,
RA Putnam N.H., Zhou S., Allen A.E., Apt K.E., Bechner M., Brzezinski M.A.,
RA Chaal B.K., Chiovitti A., Davis A.K., Demarest M.S., Detter J.C.,
RA Glavina T., Goodstein D., Hadi M.Z., Hellsten U., Hildebrand M.,
RA Jenkins B.D., Jurka J., Kapitonov V.V., Kroger N., Lau W.W., Lane T.W.,
RA Larimer F.W., Lippmeier J.C., Lucas S., Medina M., Montsant A., Obornik M.,
RA Parker M.S., Palenik B., Pazour G.J., Richardson P.M., Rynearson T.A.,
RA Saito M.A., Schwartz D.C., Thamatrakoln K., Valentin K., Vardi A.,
RA Wilkerson F.P., Rokhsar D.S.;
RT "The genome of the diatom Thalassiosira pseudonana: ecology, evolution, and
RT metabolism.";
RL Science 306:79-86(2004).
RN [2] {ECO:0000313|EMBL:ACI64077.1, ECO:0000313|Proteomes:UP000001449}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CCMP1335 {ECO:0000313|EMBL:ACI64077.1};
RX PubMed=18923393; DOI=10.1038/nature07410;
RA Bowler C., Allen A.E., Badger J.H., Grimwood J., Jabbari K., Kuo A.,
RA Maheswari U., Martens C., Maumus F., Otillar R.P., Rayko E., Salamov A.,
RA Vandepoele K., Beszteri B., Gruber A., Heijde M., Katinka M., Mock T.,
RA Valentin K., Verret F., Berges J.A., Brownlee C., Cadoret J.P.,
RA Chiovitti A., Choi C.J., Coesel S., De Martino A., Detter J.C., Durkin C.,
RA Falciatore A., Fournet J., Haruta M., Huysman M.J., Jenkins B.D.,
RA Jiroutova K., Jorgensen R.E., Joubert Y., Kaplan A., Kroger N., Kroth P.G.,
RA La Roche J., Lindquist E., Lommer M., Martin-Jezequel V., Lopez P.J.,
RA Lucas S., Mangogna M., McGinnis K., Medlin L.K., Montsant A.,
RA Oudot-Le Secq M.P., Napoli C., Obornik M., Parker M.S., Petit J.L.,
RA Porcel B.M., Poulsen N., Robison M., Rychlewski L., Rynearson T.A.,
RA Schmutz J., Shapiro H., Siaut M., Stanley M., Sussman M.R., Taylor A.R.,
RA Vardi A., von Dassow P., Vyverman W., Willis A., Wyrwicz L.S.,
RA Rokhsar D.S., Weissenbach J., Armbrust E.V., Green B.R., Van de Peer Y.,
RA Grigoriev I.V.;
RT "The Phaeodactylum genome reveals the evolutionary history of diatom
RT genomes.";
RL Nature 456:239-244(2008).
RN [3] {ECO:0000313|EMBL:ACI64077.1, ECO:0000313|Proteomes:UP000001449}
RP GENOME REANNOTATION.
RC STRAIN=CCMP1335 {ECO:0000313|EMBL:ACI64077.1};
RG Diatom Consortium;
RA Grigoriev I., Grimwood J., Kuo A., Otillar R.P., Salamov A., Detter J.C.,
RA Schmutz J., Lindquist E., Shapiro H., Lucas S., Glavina del Rio T.,
RA Bruce D., Pitluck S., Rokhsar D., Armbrust V.;
RL Submitted (SEP-2008) to the EMBL/GenBank/DDBJ databases.
CC -!- PATHWAY: Carotenoid biosynthesis; lycopene biosynthesis.
CC {ECO:0000256|ARBA:ARBA00004900}.
CC -!- SUBCELLULAR LOCATION: Plastid, chromoplast
CC {ECO:0000256|ARBA:ARBA00004260}.
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DR EMBL; CP001159; ACI64077.1; -; Genomic_DNA.
DR RefSeq; XP_002295360.1; XM_002295324.1.
DR AlphaFoldDB; B5YLG3; -.
DR STRING; 35128.B5YLG3; -.
DR PaxDb; 35128-Thaps38189; -.
DR EnsemblProtists; ACI64077; ACI64077; THAPS_38189.
DR GeneID; 7442168; -.
DR KEGG; tps:THAPS_38189; -.
DR eggNOG; KOG0029; Eukaryota.
DR HOGENOM; CLU_021719_0_0_1; -.
DR InParanoid; B5YLG3; -.
DR OMA; ANACWGF; -.
DR Proteomes; UP000001449; Chromosome 18.
DR GO; GO:0016491; F:oxidoreductase activity; IBA:GO_Central.
DR Gene3D; 3.50.50.60; FAD/NAD(P)-binding domain; 3.
DR InterPro; IPR002937; Amino_oxidase.
DR InterPro; IPR036188; FAD/NAD-bd_sf.
DR PANTHER; PTHR42923:SF41; 15-CIS-PHYTOENE DESATURASE, CHLOROPLASTIC/CHROMOPLASTIC-RELATED; 1.
DR PANTHER; PTHR42923; PROTOPORPHYRINOGEN OXIDASE; 1.
DR Pfam; PF01593; Amino_oxidase; 1.
DR SUPFAM; SSF51905; FAD/NAD(P)-binding domain; 1.
PE 4: Predicted;
KW Chromoplast {ECO:0000256|ARBA:ARBA00022904};
KW Plastid {ECO:0000256|ARBA:ARBA00022904};
KW Reference proteome {ECO:0000313|Proteomes:UP000001449}.
FT DOMAIN 10..485
FT /note="Amine oxidase"
FT /evidence="ECO:0000259|Pfam:PF01593"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:ACI64077.1"
FT NON_TER 508
FT /evidence="ECO:0000313|EMBL:ACI64077.1"
SQ SEQUENCE 508 AA; 54871 MW; 89576B162A4618EA CRC64;
IVIVGAGWGG LSAAHALATS TSSSSSQQQP LEITLVDAAP RVGGLVRDGF QTINSTISSA
DAEAGQHGFW DNYHNIFHFL ETLPTLGSLD DVLTGYAEQG QYSPNGLEAV WPIYRESKPQ
LPTGLAQALY TRFMNLPAID RASAAPLVLA FSDFDDSVEA WKRYDSISFR DLCIKLGVSK
RCYDEAFEPM ILTGLFAPGA ECSAAAALGM AYFFVLKSQN SFDVRWCRGN IGKVIFDPWV
DYLKERGVIF LTSTRVQGFE LGESTRVSKA ICSQVASDGV TVETITLAAD VVVFATGGAA
LNGIVRNSPD LAQYSEFRRF ANLRGTGVLA TRLFLDTVLD TPYSANACWG FDKGVGMTFF
DINKLHGKDT DAEKSGVGSI IEIDYYHAAA LLVMSDESIV QKAKNDLDTI LGSQSINAKV
VDAAIVRLPQ AVNWYSPGSY DNMPDVQSTS IPNIFFCGDI VRSRHGSWSQ EKAFVSGIEA
ANKILERSDG SGIIPLSADE PHVALGRS
//