ID B5YMR1_THAPS Unreviewed; 428 AA.
AC B5YMR1;
DT 25-NOV-2008, integrated into UniProtKB/TrEMBL.
DT 25-NOV-2008, sequence version 1.
DT 24-JAN-2024, entry version 38.
DE RecName: Full=PiggyBac transposable element-derived protein domain-containing protein {ECO:0000259|Pfam:PF13843};
GN ORFNames=THAPS_6879 {ECO:0000313|EMBL:ACI64505.1};
OS Thalassiosira pseudonana (Marine diatom) (Cyclotella nana).
OC Eukaryota; Sar; Stramenopiles; Ochrophyta; Bacillariophyta;
OC Coscinodiscophyceae; Thalassiosirophycidae; Thalassiosirales;
OC Thalassiosiraceae; Thalassiosira.
OX NCBI_TaxID=35128 {ECO:0000313|EMBL:ACI64505.1, ECO:0000313|Proteomes:UP000001449};
RN [1] {ECO:0000313|EMBL:ACI64505.1, ECO:0000313|Proteomes:UP000001449}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CCMP1335 {ECO:0000313|EMBL:ACI64505.1};
RX PubMed=15459382; DOI=10.1126/science.1101156;
RA Armbrust E.V., Berges J.A., Bowler C., Green B.R., Martinez D.,
RA Putnam N.H., Zhou S., Allen A.E., Apt K.E., Bechner M., Brzezinski M.A.,
RA Chaal B.K., Chiovitti A., Davis A.K., Demarest M.S., Detter J.C.,
RA Glavina T., Goodstein D., Hadi M.Z., Hellsten U., Hildebrand M.,
RA Jenkins B.D., Jurka J., Kapitonov V.V., Kroger N., Lau W.W., Lane T.W.,
RA Larimer F.W., Lippmeier J.C., Lucas S., Medina M., Montsant A., Obornik M.,
RA Parker M.S., Palenik B., Pazour G.J., Richardson P.M., Rynearson T.A.,
RA Saito M.A., Schwartz D.C., Thamatrakoln K., Valentin K., Vardi A.,
RA Wilkerson F.P., Rokhsar D.S.;
RT "The genome of the diatom Thalassiosira pseudonana: ecology, evolution, and
RT metabolism.";
RL Science 306:79-86(2004).
RN [2] {ECO:0000313|EMBL:ACI64505.1, ECO:0000313|Proteomes:UP000001449}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CCMP1335 {ECO:0000313|EMBL:ACI64505.1};
RX PubMed=18923393; DOI=10.1038/nature07410;
RA Bowler C., Allen A.E., Badger J.H., Grimwood J., Jabbari K., Kuo A.,
RA Maheswari U., Martens C., Maumus F., Otillar R.P., Rayko E., Salamov A.,
RA Vandepoele K., Beszteri B., Gruber A., Heijde M., Katinka M., Mock T.,
RA Valentin K., Verret F., Berges J.A., Brownlee C., Cadoret J.P.,
RA Chiovitti A., Choi C.J., Coesel S., De Martino A., Detter J.C., Durkin C.,
RA Falciatore A., Fournet J., Haruta M., Huysman M.J., Jenkins B.D.,
RA Jiroutova K., Jorgensen R.E., Joubert Y., Kaplan A., Kroger N., Kroth P.G.,
RA La Roche J., Lindquist E., Lommer M., Martin-Jezequel V., Lopez P.J.,
RA Lucas S., Mangogna M., McGinnis K., Medlin L.K., Montsant A.,
RA Oudot-Le Secq M.P., Napoli C., Obornik M., Parker M.S., Petit J.L.,
RA Porcel B.M., Poulsen N., Robison M., Rychlewski L., Rynearson T.A.,
RA Schmutz J., Shapiro H., Siaut M., Stanley M., Sussman M.R., Taylor A.R.,
RA Vardi A., von Dassow P., Vyverman W., Willis A., Wyrwicz L.S.,
RA Rokhsar D.S., Weissenbach J., Armbrust E.V., Green B.R., Van de Peer Y.,
RA Grigoriev I.V.;
RT "The Phaeodactylum genome reveals the evolutionary history of diatom
RT genomes.";
RL Nature 456:239-244(2008).
RN [3] {ECO:0000313|EMBL:ACI64505.1, ECO:0000313|Proteomes:UP000001449}
RP GENOME REANNOTATION.
RC STRAIN=CCMP1335 {ECO:0000313|EMBL:ACI64505.1};
RG Diatom Consortium;
RA Grigoriev I., Grimwood J., Kuo A., Otillar R.P., Salamov A., Detter J.C.,
RA Schmutz J., Lindquist E., Shapiro H., Lucas S., Glavina del Rio T.,
RA Bruce D., Pitluck S., Rokhsar D., Armbrust V.;
RL Submitted (SEP-2008) to the EMBL/GenBank/DDBJ databases.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; CP001160; ACI64505.1; -; Genomic_DNA.
DR RefSeq; XP_002295788.1; XM_002295752.1.
DR AlphaFoldDB; B5YMR1; -.
DR PaxDb; 35128-Thaps6879; -.
DR EnsemblProtists; ACI64505; ACI64505; THAPS_6879.
DR GeneID; 7452277; -.
DR KEGG; tps:THAPS_6879; -.
DR eggNOG; ENOG502SC5R; Eukaryota.
DR HOGENOM; CLU_036456_0_0_1; -.
DR InParanoid; B5YMR1; -.
DR Proteomes; UP000001449; Chromosome 7.
DR InterPro; IPR029526; PGBD.
DR PANTHER; PTHR46599:SF3; LD40589P; 1.
DR PANTHER; PTHR46599; PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4; 1.
DR Pfam; PF13843; DDE_Tnp_1_7; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000001449}.
FT DOMAIN 159..339
FT /note="PiggyBac transposable element-derived protein"
FT /evidence="ECO:0000259|Pfam:PF13843"
SQ SEQUENCE 428 AA; 48994 MW; 53F2E003142F4C50 CRC64;
MARKRGGIGA VGKAMARFFH PSKEVEAKCL QEGKTYKSHV LEDAIIIGRE TCRINRKNQL
VYQCRLPFMD DNKVYAIVCS NMRIVEEGAT PFNDEAAATP ILRDDSIELQ GIEVDTEQPA
PENITNEPLL STTGKWENPR TYGWAAASSW PASSVFENES KTVKLMLEMT EPIHSTGKIV
TLDSGFCVSA GILALHDKGV YGQALIKKRG RYWPRGVPGD EIDKHFEGKQ IGEFECFVQE
KEGKQFLIHC HKEDKYVCKV MSTHGRMEET DRVAWRLGKD GWSSFKYTEA FTNHCIAKHW
VDDVNNRRHS PIGLEDIWAT KWWPHQQFTF MCSVAEVNAI NSMARAMGVP AVHQVVFRKQ
LTKEMMHNKL TETGGIRHSP IRGRKRSRES LDMEHKLMTK PTYTESWEKN LKRFKESDLY
ATFWSVML
//
