ID B6JVZ8_SCHJY Unreviewed; 539 AA.
AC B6JVZ8;
DT 16-DEC-2008, integrated into UniProtKB/TrEMBL.
DT 16-OCT-2013, sequence version 2.
DT 27-MAR-2024, entry version 55.
DE SubName: Full=RNA-binding protein Cip2 {ECO:0000313|EMBL:EEB05549.2};
GN Name=cip2 {ECO:0000313|JaponicusDB:SJAG_00563};
GN ORFNames=SJAG_00563 {ECO:0000313|EMBL:EEB05549.2};
OS Schizosaccharomyces japonicus (strain yFS275 / FY16936) (Fission yeast).
OC Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina;
OC Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae;
OC Schizosaccharomyces.
OX NCBI_TaxID=402676 {ECO:0000313|EMBL:EEB05549.2, ECO:0000313|Proteomes:UP000001744};
RN [1] {ECO:0000313|EMBL:EEB05549.2, ECO:0000313|Proteomes:UP000001744}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=yFS275 / FY16936 {ECO:0000313|Proteomes:UP000001744};
RX PubMed=21511999; DOI=10.1126/science.1203357;
RA Rhind N., Chen Z., Yassour M., Thompson D.A., Haas B.J., Habib N.,
RA Wapinski I., Roy S., Lin M.F., Heiman D.I., Young S.K., Furuya K., Guo Y.,
RA Pidoux A., Chen H.M., Robbertse B., Goldberg J.M., Aoki K., Bayne E.H.,
RA Berlin A.M., Desjardins C.A., Dobbs E., Dukaj L., Fan L., FitzGerald M.G.,
RA French C., Gujja S., Hansen K., Keifenheim D., Levin J.Z., Mosher R.A.,
RA Mueller C.A., Pfiffner J., Priest M., Russ C., Smialowska A., Swoboda P.,
RA Sykes S.M., Vaughn M., Vengrova S., Yoder R., Zeng Q., Allshire R.,
RA Baulcombe D., Birren B.W., Brown W., Ekwall K., Kellis M., Leatherwood J.,
RA Levin H., Margalit H., Martienssen R., Nieduszynski C.A., Spatafora J.W.,
RA Friedman N., Dalgaard J.Z., Baumann P., Niki H., Regev A., Nusbaum C.;
RT "Comparative functional genomics of the fission yeasts.";
RL Science 332:930-936(2011).
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DR EMBL; KE651166; EEB05549.2; -; Genomic_DNA.
DR RefSeq; XP_002171842.2; XM_002171806.2.
DR AlphaFoldDB; B6JVZ8; -.
DR STRING; 402676.B6JVZ8; -.
DR EnsemblFungi; EEB05549; EEB05549; SJAG_00563.
DR GeneID; 7051261; -.
DR JaponicusDB; SJAG_00563; cip2.
DR VEuPathDB; FungiDB:SJAG_00563; -.
DR eggNOG; KOG0108; Eukaryota.
DR HOGENOM; CLU_473406_0_0_1; -.
DR OMA; LFYHRTD; -.
DR OrthoDB; 1363189at2759; -.
DR Proteomes; UP000001744; Unassembled WGS sequence.
DR GO; GO:0005737; C:cytoplasm; IEA:EnsemblFungi.
DR GO; GO:0071014; C:post-mRNA release spliceosomal complex; IEA:EnsemblFungi.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0034599; P:cellular response to oxidative stress; IEA:EnsemblFungi.
DR GO; GO:2000815; P:regulation of mRNA stability involved in response to oxidative stress; IEA:EnsemblFungi.
DR CDD; cd12253; RRM_PIN4_like; 1.
DR Gene3D; 3.30.70.330; -; 1.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR034186; PIN4-like_RRM.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR000504; RRM_dom.
DR PANTHER; PTHR23003; RNA RECOGNITION MOTIF RRM DOMAIN CONTAINING PROTEIN; 1.
DR PANTHER; PTHR23003:SF17; RNA-BINDING PROTEIN PIN4; 1.
DR Pfam; PF00076; RRM_1; 1.
DR SMART; SM00360; RRM; 1.
DR SUPFAM; SSF54928; RNA-binding domain, RBD; 1.
DR PROSITE; PS50102; RRM; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000001744};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884, ECO:0000256|PROSITE-
KW ProRule:PRU00176}.
FT DOMAIN 238..316
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT REGION 428..469
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 539 AA; 58553 MW; 307DBCCEE0418052 CRC64;
MAEGMSQRPL TPLSQAFLAT NNLSPVTSPL PFHSDLPGLR KKRSNFFPKF DETNAVDDER
KAAFPPSNNY GYFDSRFSAE RAMFPSSAAS TPGIGIGENF DMHSSKETMF DGANALPIAL
QQALDAGVAP STKTSLASGR TRLQTAWQEH NKSSGLSLSF FSAKNAFSNL GPLTTSALPP
SFMGSSLLES ARGAQTPSAL SSASVVKGSN GNNGLEGSVN GNRVSAAIEE QQEETIPTAI
VIKNIPFSLK KEVLFKVFTA LDIPRPYAFN YHFDNGVFRG LAFANFHTPE EARIVVQSLN
GYEISGRRLR VEWKRQLPAA ERERIERGKQ EKRLSDERRK QMKTMFSVHS LGAGTDIDMN
DSATLNLYSH MILFYHRTDS MNELVLGPNL SAEEVRVSKL LASRLGLNCT IRGEGVDEHK
QVVVSFPSEP MSNSSVSSSS NNGSNNNNNA PNVSSPLVGG GTTNSLRNGS SSVNNVASFR
RGAPSLQLSD NMKLLRGYAD FKNAFSDVRS NPVTPLESPS FFSNLSFSSQ NKNDPLLPL
//
