ID B6XSS7_9BIFI Unreviewed; 346 AA.
AC B6XSS7;
DT 20-JAN-2009, integrated into UniProtKB/TrEMBL.
DT 20-JAN-2009, sequence version 1.
DT 27-MAR-2024, entry version 64.
DE SubName: Full=Transcriptional regulator, LacI family {ECO:0000313|EMBL:EEB22290.1};
GN ORFNames=BIFCAT_00234 {ECO:0000313|EMBL:EEB22290.1};
OS Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.
OC Bacteria; Actinomycetota; Actinomycetes; Bifidobacteriales;
OC Bifidobacteriaceae; Bifidobacterium.
OX NCBI_TaxID=566552 {ECO:0000313|EMBL:EEB22290.1, ECO:0000313|Proteomes:UP000003882};
RN [1] {ECO:0000313|EMBL:EEB22290.1, ECO:0000313|Proteomes:UP000003882}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 16992 {ECO:0000313|EMBL:EEB22290.1,
RC ECO:0000313|Proteomes:UP000003882};
RA Sudarsanam P., Ley R., Guruge J., Turnbaugh P.J., Mahowald M., Liep D.,
RA Gordon J.;
RT "Draft genome sequence of Bifidobacterium catenulatum (DSM 16992).";
RL Submitted (OCT-2008) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:EEB22290.1, ECO:0000313|Proteomes:UP000003882}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 16992 {ECO:0000313|EMBL:EEB22290.1,
RC ECO:0000313|Proteomes:UP000003882};
RA Fulton L., Clifton S., Fulton B., Xu J., Minx P., Pepin K.H., Johnson M.,
RA Bhonagiri V., Nash W.E., Mardis E.R., Wilson R.K.;
RL Submitted (OCT-2008) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EEB22290.1}.
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DR EMBL; ABXY01000005; EEB22290.1; -; Genomic_DNA.
DR AlphaFoldDB; B6XSS7; -.
DR eggNOG; COG1609; Bacteria.
DR Proteomes; UP000003882; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd01392; HTH_LacI; 1.
DR CDD; cd01544; PBP1_GalR; 1.
DR Gene3D; 3.40.50.2300; -; 1.
DR Gene3D; 1.10.260.40; lambda repressor-like DNA-binding domains; 1.
DR InterPro; IPR000843; HTH_LacI.
DR InterPro; IPR046335; LacI/GalR-like_sensor.
DR InterPro; IPR010982; Lambda_DNA-bd_dom_sf.
DR InterPro; IPR028082; Peripla_BP_I.
DR PANTHER; PTHR30146:SF151; HTH-TYPE TRANSCRIPTIONAL REPRESSOR MELR; 1.
DR PANTHER; PTHR30146; LACI-RELATED TRANSCRIPTIONAL REPRESSOR; 1.
DR Pfam; PF00356; LacI; 1.
DR Pfam; PF13377; Peripla_BP_3; 1.
DR SMART; SM00354; HTH_LACI; 1.
DR SUPFAM; SSF47413; lambda repressor-like DNA-binding domains; 1.
DR SUPFAM; SSF53822; Periplasmic binding protein-like I; 1.
DR PROSITE; PS50932; HTH_LACI_2; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 10..56
FT /note="HTH lacI-type"
FT /evidence="ECO:0000259|PROSITE:PS50932"
SQ SEQUENCE 346 AA; 38245 MW; 91130028E49FB016 CRC64;
MMALRRIRMA TIREIAKRVG FSQATVSRVL KDDPTFSVKD STREKILNAS LEMGYKNVPQ
YQRITIPQDV AILDNVVPDE GLQDAYFDEL REVLVKHAEE QLMNVTMQKD VDSLIANADK
YAGFISIGPS PLDRKTLHRL HKKLPHGVFI DINPAPALFD SVQPDLEQTI LDAIDALMAS
GCSRIGFIGG LGNIMGEHEY PEDVRTFAFR NWALRLGLDV KGLVYADGPF TVENGRLQGC
QLVQDHADDL PDAVIVAADP LAVGVLQAFA TENVMVPRDI KVISINNQEI AKYTSPALSS
YDISQDELAK AAVLMLAEAL TANRKISQHM RISTSLVARD SFTPQD
//
