ID B7FQI5_PHATC Unreviewed; 349 AA.
AC B7FQI5;
DT 10-FEB-2009, integrated into UniProtKB/TrEMBL.
DT 10-FEB-2009, sequence version 1.
DT 24-JAN-2024, entry version 51.
DE RecName: Full=Sm domain-containing protein {ECO:0000259|SMART:SM00651};
GN ORFNames=PHATRDRAFT_43068 {ECO:0000313|EMBL:EEC51342.1};
OS Phaeodactylum tricornutum (strain CCAP 1055/1).
OC Eukaryota; Sar; Stramenopiles; Ochrophyta; Bacillariophyta;
OC Bacillariophyceae; Bacillariophycidae; Naviculales; Phaeodactylaceae;
OC Phaeodactylum.
OX NCBI_TaxID=556484 {ECO:0000313|EMBL:EEC51342.1, ECO:0000313|Proteomes:UP000000759};
RN [1] {ECO:0000313|EMBL:EEC51342.1, ECO:0000313|Proteomes:UP000000759}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CCAP 1055/1 {ECO:0000313|EMBL:EEC51342.1,
RC ECO:0000313|Proteomes:UP000000759};
RX PubMed=18923393; DOI=10.1038/nature07410;
RA Bowler C., Allen A.E., Badger J.H., Grimwood J., Jabbari K., Kuo A.,
RA Maheswari U., Martens C., Maumus F., Otillar R.P., Rayko E., Salamov A.,
RA Vandepoele K., Beszteri B., Gruber A., Heijde M., Katinka M., Mock T.,
RA Valentin K., Verret F., Berges J.A., Brownlee C., Cadoret J.P.,
RA Chiovitti A., Choi C.J., Coesel S., De Martino A., Detter J.C., Durkin C.,
RA Falciatore A., Fournet J., Haruta M., Huysman M.J., Jenkins B.D.,
RA Jiroutova K., Jorgensen R.E., Joubert Y., Kaplan A., Kroger N., Kroth P.G.,
RA La Roche J., Lindquist E., Lommer M., Martin-Jezequel V., Lopez P.J.,
RA Lucas S., Mangogna M., McGinnis K., Medlin L.K., Montsant A.,
RA Oudot-Le Secq M.P., Napoli C., Obornik M., Parker M.S., Petit J.L.,
RA Porcel B.M., Poulsen N., Robison M., Rychlewski L., Rynearson T.A.,
RA Schmutz J., Shapiro H., Siaut M., Stanley M., Sussman M.R., Taylor A.R.,
RA Vardi A., von Dassow P., Vyverman W., Willis A., Wyrwicz L.S.,
RA Rokhsar D.S., Weissenbach J., Armbrust E.V., Green B.R., Van de Peer Y.,
RA Grigoriev I.V.;
RT "The Phaeodactylum genome reveals the evolutionary history of diatom
RT genomes.";
RL Nature 456:239-244(2008).
RN [2] {ECO:0000313|Proteomes:UP000000759}
RP GENOME REANNOTATION.
RC STRAIN=CCAP 1055/1 {ECO:0000313|Proteomes:UP000000759};
RG Diatom Consortium;
RA Grigoriev I., Grimwood J., Kuo A., Otillar R.P., Salamov A., Detter J.C.,
RA Lindquist E., Shapiro H., Lucas S., Glavina del Rio T., Pitluck S.,
RA Rokhsar D., Bowler C.;
RL Submitted (AUG-2008) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CM000605; EEC51342.1; -; Genomic_DNA.
DR RefSeq; XP_002176879.1; XM_002176843.1.
DR AlphaFoldDB; B7FQI5; -.
DR STRING; 556484.B7FQI5; -.
DR PaxDb; 2850-Phatr43068; -.
DR GeneID; 7196857; -.
DR KEGG; pti:PHATRDRAFT_43068; -.
DR eggNOG; ENOG502QRZV; Eukaryota.
DR HOGENOM; CLU_664800_0_0_1; -.
DR InParanoid; B7FQI5; -.
DR OrthoDB; 51292at2759; -.
DR Proteomes; UP000000759; Chromosome 1.
DR GO; GO:0071209; F:U7 snRNA binding; IEA:InterPro.
DR Gene3D; 2.30.30.100; -; 1.
DR InterPro; IPR039267; Lsm11.
DR InterPro; IPR010920; LSM_dom_sf.
DR InterPro; IPR001163; Sm_dom_euk/arc.
DR PANTHER; PTHR21415; U7 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM11; 1.
DR PANTHER; PTHR21415:SF1; U7 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM11; 1.
DR Pfam; PF01423; LSM; 1.
DR SMART; SM00651; Sm; 1.
DR SUPFAM; SSF50182; Sm-like ribonucleoproteins; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000000759}.
FT DOMAIN 222..321
FT /note="Sm"
FT /evidence="ECO:0000259|SMART:SM00651"
FT REGION 1..20
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 349 AA; 39881 MW; 6033B002F030E2AD CRC64;
MTGHRSASAP EQEHTHSLSV PISLGRPSLR LRLEAYYALI SPDQISNNAS WKERFNQIWR
KFGGSVEGER NLATKLSKKY GTAIRLQTVD LTRTTAADTG TSKSAWKRKE AYYDPKQSQQ
KSGVLDFGSQ RFDPNATLAA PLSHVERDNV FVVSCPLLDR VELCKGLLPC SDPLYQRSKK
RERSGISVQV KNDESTKKVK PPSCFAEIAQ DLQEGPFALM YNTFVHKQRV RVVLRYVNGI
RGIVTGYLVA FDKHFNLILR DVEEVYSKRA ERGFEQSNAE MELRRRRTNL YRATDHLDWC
SRRRCMRQIM VRGDNVVIVY RAKDERSALH ENSSLFQGDQ HVSANDAPQ
//
