ID B7G2T7_PHATC Unreviewed; 1023 AA.
AC B7G2T7;
DT 10-FEB-2009, integrated into UniProtKB/TrEMBL.
DT 10-FEB-2009, sequence version 1.
DT 24-JAN-2024, entry version 77.
DE SubName: Full=Imitation switch isoform 1, alias nucleosome remodeling factor 140 kDa subunit {ECO:0000313|EMBL:EEC47183.1};
GN Name=NURF-140 {ECO:0000313|EMBL:EEC47183.1};
GN ORFNames=PHATRDRAFT_28551 {ECO:0000313|EMBL:EEC47183.1};
OS Phaeodactylum tricornutum (strain CCAP 1055/1).
OC Eukaryota; Sar; Stramenopiles; Ochrophyta; Bacillariophyta;
OC Bacillariophyceae; Bacillariophycidae; Naviculales; Phaeodactylaceae;
OC Phaeodactylum.
OX NCBI_TaxID=556484 {ECO:0000313|EMBL:EEC47183.1, ECO:0000313|Proteomes:UP000000759};
RN [1] {ECO:0000313|EMBL:EEC47183.1, ECO:0000313|Proteomes:UP000000759}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CCAP 1055/1 {ECO:0000313|EMBL:EEC47183.1,
RC ECO:0000313|Proteomes:UP000000759};
RX PubMed=18923393; DOI=10.1038/nature07410;
RA Bowler C., Allen A.E., Badger J.H., Grimwood J., Jabbari K., Kuo A.,
RA Maheswari U., Martens C., Maumus F., Otillar R.P., Rayko E., Salamov A.,
RA Vandepoele K., Beszteri B., Gruber A., Heijde M., Katinka M., Mock T.,
RA Valentin K., Verret F., Berges J.A., Brownlee C., Cadoret J.P.,
RA Chiovitti A., Choi C.J., Coesel S., De Martino A., Detter J.C., Durkin C.,
RA Falciatore A., Fournet J., Haruta M., Huysman M.J., Jenkins B.D.,
RA Jiroutova K., Jorgensen R.E., Joubert Y., Kaplan A., Kroger N., Kroth P.G.,
RA La Roche J., Lindquist E., Lommer M., Martin-Jezequel V., Lopez P.J.,
RA Lucas S., Mangogna M., McGinnis K., Medlin L.K., Montsant A.,
RA Oudot-Le Secq M.P., Napoli C., Obornik M., Parker M.S., Petit J.L.,
RA Porcel B.M., Poulsen N., Robison M., Rychlewski L., Rynearson T.A.,
RA Schmutz J., Shapiro H., Siaut M., Stanley M., Sussman M.R., Taylor A.R.,
RA Vardi A., von Dassow P., Vyverman W., Willis A., Wyrwicz L.S.,
RA Rokhsar D.S., Weissenbach J., Armbrust E.V., Green B.R., Van de Peer Y.,
RA Grigoriev I.V.;
RT "The Phaeodactylum genome reveals the evolutionary history of diatom
RT genomes.";
RL Nature 456:239-244(2008).
RN [2] {ECO:0000313|Proteomes:UP000000759}
RP GENOME REANNOTATION.
RC STRAIN=CCAP 1055/1 {ECO:0000313|Proteomes:UP000000759};
RG Diatom Consortium;
RA Grigoriev I., Grimwood J., Kuo A., Otillar R.P., Salamov A., Detter J.C.,
RA Lindquist E., Shapiro H., Lucas S., Glavina del Rio T., Pitluck S.,
RA Rokhsar D., Bowler C.;
RL Submitted (AUG-2008) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CM000614; EEC47183.1; -; Genomic_DNA.
DR RefSeq; XP_002181260.1; XM_002181224.1.
DR AlphaFoldDB; B7G2T7; -.
DR STRING; 556484.B7G2T7; -.
DR PaxDb; 2850-Phatr28551; -.
DR GeneID; 7201969; -.
DR KEGG; pti:PHATRDRAFT_28551; -.
DR eggNOG; KOG0385; Eukaryota.
DR InParanoid; B7G2T7; -.
DR OrthoDB; 5482994at2759; -.
DR Proteomes; UP000000759; Chromosome 12.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0140658; F:ATP-dependent chromatin remodeler activity; IEA:InterPro.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.
DR GO; GO:0031491; F:nucleosome binding; IEA:InterPro.
DR CDD; cd18793; SF2_C_SNF; 1.
DR Gene3D; 1.10.10.60; Homeodomain-like; 2.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR Gene3D; 3.40.50.10810; Tandem AAA-ATPase domain; 1.
DR InterPro; IPR014001; Helicase_ATP-bd.
DR InterPro; IPR001650; Helicase_C.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR036306; ISWI_HAND-dom_sf.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR017884; SANT_dom.
DR InterPro; IPR015195; SLIDE.
DR InterPro; IPR038718; SNF2-like_sf.
DR InterPro; IPR000330; SNF2_N.
DR PANTHER; PTHR45623; CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATED-RELATED; 1.
DR PANTHER; PTHR45623:SF49; ISW-1; 1.
DR Pfam; PF00271; Helicase_C; 1.
DR Pfam; PF09111; SLIDE; 1.
DR Pfam; PF00176; SNF2-rel_dom; 1.
DR SMART; SM00487; DEXDc; 1.
DR SMART; SM00490; HELICc; 1.
DR SUPFAM; SSF101224; HAND domain of the nucleosome remodeling ATPase ISWI; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 2.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 2.
DR PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR PROSITE; PS51194; HELICASE_CTER; 1.
DR PROSITE; PS51293; SANT; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000000759}.
FT DOMAIN 161..332
FT /note="Helicase ATP-binding"
FT /evidence="ECO:0000259|PROSITE:PS51192"
FT DOMAIN 462..613
FT /note="Helicase C-terminal"
FT /evidence="ECO:0000259|PROSITE:PS51194"
FT DOMAIN 809..864
FT /note="SANT"
FT /evidence="ECO:0000259|PROSITE:PS51293"
FT REGION 1..69
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 981..1023
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..42
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 44..60
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 981..996
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1023 AA; 116914 MW; 5192EA8070C59100 CRC64;
MEGMDLEDDD GQVDEAGDDE EATESDNAPV ENEEDFAALA TEEAQEMEEA RRERTELMAA
EQKKAMGSNP QPLTAAERLE YILAQSDVFA HFLAGSVAAG SKKGKGSRGK KGRMTEAEED
AQLLKSAQSK RRVIRVDQQP SNLAPHCRMH PYQLEGLNWL IKLHDHGING ILADEMGLGK
TLQTISLLAY LRESRGVRGA HMVIVPKSVV GNWIREFKKW CPSIKAIRMG GTKDERQKFV
TEDLPLDPNT GKRKFDVLVT SYEGLLREKG KLSRIPWKYV IIDEAHRIKN ENSSLSKVVR
TMKTEFRLLI TGTPLQNNLR ELWALLNFLM PDIFGDAEQF DEWFSLTDAS GKENVIKKLH
TILRPFMLRR VKKDVATSLP PKKETKLYIG LTKMQQEWYV RCLQKDAHEL NKLGGPDRNR
LLNVLMQLRK VCNHPYLFDG AEQGPPYIDG PHLWENSGKM QLMHKLLPKL QAKGSRVLIF
CQMTRVLDIL EDYFRLTKLE YCRIDGNTDG ERRDSQMDEF NAEGSSKFAF LLSTRAGGLG
INLATADIVI LYDSDWNPQV DLQAMDRAHR IGQTKPVQVF RFVTEGTVEE KIIERADRKL
FLDAAVIQQG RLAEQHSSLE KGDLMKMVRF GADQILSGTG GTYTDEDIDA LIARGEERTT
EMQAKLQTDA QHNLANFSLM AEDEGGTDTF SFGGKNYRDS EKSAGNFINL PQRQRKRNYD
LSGSTGNTGL SGSMKAHAAD AAAKKKRKGP ALHDYQLFNM SRLHALIEKE RALAREELLQ
LAHAKEQGLD TSFVLSSKEE AERRSLLAEG FPDWSRKDFR SFCLSLERHG RYDFNSIAQD
VLRETDKDLQ EVQRYFVAFF TNYTRINDWQ KILDKIERGE KKILRLRQIR DAIQEKVERH
LEDAISYGSS GRGRGYQEEE DAFLVCMMYR HGYGAAERIR MEIRRAWQFR FDWYFKSRSA
QEIQKRCDML VRVVERDNAE VREKEAEEER KQERDSFTVP TPQSAKDSFQ KVPEGAVAQF
ASN
//