ID B7GBI8_PHATC Unreviewed; 1222 AA.
AC B7GBI8;
DT 10-FEB-2009, integrated into UniProtKB/TrEMBL.
DT 10-FEB-2009, sequence version 1.
DT 27-MAR-2024, entry version 54.
DE RecName: Full=Ricin B lectin domain-containing protein {ECO:0000259|SMART:SM00458};
GN ORFNames=PHATRDRAFT_49706 {ECO:0000313|EMBL:EEC44220.1};
OS Phaeodactylum tricornutum (strain CCAP 1055/1).
OC Eukaryota; Sar; Stramenopiles; Ochrophyta; Bacillariophyta;
OC Bacillariophyceae; Bacillariophycidae; Naviculales; Phaeodactylaceae;
OC Phaeodactylum.
OX NCBI_TaxID=556484 {ECO:0000313|EMBL:EEC44220.1, ECO:0000313|Proteomes:UP000000759};
RN [1] {ECO:0000313|EMBL:EEC44220.1, ECO:0000313|Proteomes:UP000000759}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CCAP 1055/1 {ECO:0000313|EMBL:EEC44220.1,
RC ECO:0000313|Proteomes:UP000000759};
RX PubMed=18923393; DOI=10.1038/nature07410;
RA Bowler C., Allen A.E., Badger J.H., Grimwood J., Jabbari K., Kuo A.,
RA Maheswari U., Martens C., Maumus F., Otillar R.P., Rayko E., Salamov A.,
RA Vandepoele K., Beszteri B., Gruber A., Heijde M., Katinka M., Mock T.,
RA Valentin K., Verret F., Berges J.A., Brownlee C., Cadoret J.P.,
RA Chiovitti A., Choi C.J., Coesel S., De Martino A., Detter J.C., Durkin C.,
RA Falciatore A., Fournet J., Haruta M., Huysman M.J., Jenkins B.D.,
RA Jiroutova K., Jorgensen R.E., Joubert Y., Kaplan A., Kroger N., Kroth P.G.,
RA La Roche J., Lindquist E., Lommer M., Martin-Jezequel V., Lopez P.J.,
RA Lucas S., Mangogna M., McGinnis K., Medlin L.K., Montsant A.,
RA Oudot-Le Secq M.P., Napoli C., Obornik M., Parker M.S., Petit J.L.,
RA Porcel B.M., Poulsen N., Robison M., Rychlewski L., Rynearson T.A.,
RA Schmutz J., Shapiro H., Siaut M., Stanley M., Sussman M.R., Taylor A.R.,
RA Vardi A., von Dassow P., Vyverman W., Willis A., Wyrwicz L.S.,
RA Rokhsar D.S., Weissenbach J., Armbrust E.V., Green B.R., Van de Peer Y.,
RA Grigoriev I.V.;
RT "The Phaeodactylum genome reveals the evolutionary history of diatom
RT genomes.";
RL Nature 456:239-244(2008).
RN [2] {ECO:0000313|Proteomes:UP000000759}
RP GENOME REANNOTATION.
RC STRAIN=CCAP 1055/1 {ECO:0000313|Proteomes:UP000000759};
RG Diatom Consortium;
RA Grigoriev I., Grimwood J., Kuo A., Otillar R.P., Salamov A., Detter J.C.,
RA Lindquist E., Shapiro H., Lucas S., Glavina del Rio T., Pitluck S.,
RA Rokhsar D., Bowler C.;
RL Submitted (AUG-2008) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CM000625; EEC44220.1; -; Genomic_DNA.
DR RefSeq; XP_002184471.1; XM_002184435.1.
DR AlphaFoldDB; B7GBI8; -.
DR STRING; 556484.B7GBI8; -.
DR PaxDb; 2850-Phatr49706; -.
DR GeneID; 7198329; -.
DR KEGG; pti:PHATRDRAFT_49706; -.
DR eggNOG; ENOG502SCD5; Eukaryota.
DR InParanoid; B7GBI8; -.
DR OrthoDB; 2433441at2759; -.
DR Proteomes; UP000000759; Chromosome 23.
DR CDD; cd02851; E_set_GO_C; 1.
DR CDD; cd00161; RICIN; 2.
DR Gene3D; 2.80.10.50; -; 2.
DR Gene3D; 2.130.10.80; Galactose oxidase/kelch, beta-propeller; 1.
DR Gene3D; 2.60.120.430; Galactose-binding lectin; 1.
DR Gene3D; 2.60.40.10; Immunoglobulins; 1.
DR InterPro; IPR011043; Gal_Oxase/kelch_b-propeller.
DR InterPro; IPR037293; Gal_Oxidase_central_sf.
DR InterPro; IPR015202; GO-like_E_set.
DR InterPro; IPR013783; Ig-like_fold.
DR InterPro; IPR014756; Ig_E-set.
DR InterPro; IPR006652; Kelch_1.
DR InterPro; IPR021720; Malectin_dom.
DR InterPro; IPR035992; Ricin_B-like_lectins.
DR InterPro; IPR000772; Ricin_B_lectin.
DR PANTHER; PTHR32208:SF68; GALACTOSE OXIDASE; 1.
DR PANTHER; PTHR32208; SECRETED PROTEIN-RELATED; 1.
DR Pfam; PF09118; GO-like_E_set; 1.
DR Pfam; PF13964; Kelch_6; 1.
DR Pfam; PF11721; Malectin; 1.
DR Pfam; PF00652; Ricin_B_lectin; 1.
DR Pfam; PF14200; RicinB_lectin_2; 1.
DR SMART; SM00612; Kelch; 2.
DR SMART; SM00458; RICIN; 2.
DR SUPFAM; SSF81296; E set domains; 1.
DR SUPFAM; SSF50965; Galactose oxidase, central domain; 1.
DR SUPFAM; SSF50370; Ricin B-like lectins; 2.
DR PROSITE; PS50231; RICIN_B_LECTIN; 2.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000000759};
KW Signal {ECO:0000256|ARBA:ARBA00022729}.
FT DOMAIN 60..197
FT /note="Ricin B lectin"
FT /evidence="ECO:0000259|SMART:SM00458"
FT DOMAIN 397..532
FT /note="Ricin B lectin"
FT /evidence="ECO:0000259|SMART:SM00458"
FT REGION 542..612
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 645..684
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 572..612
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 645..678
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1222 AA; 129908 MW; AB8F1B7D4F2BCB20 CRC64;
MPFLIGVAIS SRRAEYLVSL IVYGAMPQLC LKGKPSLEAR ASFILDRCHR QPKTAFKTQT
TPQRQIVSEL SLCVEVAGAS QDDGASIFQG NCNDGNKHQV FDFIPASGTD NAYHQIRASH
SNKCLGVADG ALAPGADIVQ LSCVDNDPAT LWKQRDGVLI LQHSGYCLSV DASSRSTSGA
FMVQWFCDSP SVKWQVKTVS EQYDGLQQLL KRSNFARRSE SGFYLSTGTT HDNQFLTTNS
SWSETETDGA TYSGCGSYGQ DTFNRHRTGP AFVFTIPGFV AGDTYDVTMG FAEMWVPQCQ
DGKRIMNITV NGRTFAQDLD VYNAAGGCRT ALILTKSFEA SSRGEFVIDF TSTIHNPMVS
FIQIQHVGAN AMQARMLADV PTASPNLSIE PTIARATNVS TIVSEGFSGL CVDILGGSVS
DGAQAVQASC NGGDSQEYQF LIVGEGQFQV VASHSQKCLG VADLDVTDSA DVIQLPCTSN
TLWYVVGGGA YLQLRVLHSA KCLSIFGASI APGTKLVQEA CDEGPDQLWR VADGLFAEET
LEPSASAAPS PSPSVSFEPT RAGAGKGPPA PTIQPTLSNA PSSMPSLSAL RGSSPPSQQP
SQTVSVSPSV SVEPTIAPGP PLFYLKTGTN QDLAYISAPS FAPTFSSAPT ESSEVPSLAP
STSVSPSTSP TSSAEPTVAP EPNPWEGEYA MTLVAVAAAN LDDGRILAWS AWSRTHYARS
VGKTFISIFD PATNESTEGE ITNTNHDMFC PGTATLGDGR IMITGGSNAA SVTFFDPSAN
SWYRGPPMKI PRGYHSMTVL GDGSVFTLGG SWSGAGRGNR GGEVWSPTGG WVLKSNILIP
GSSSLLTNDV GGVFRSDNHM WLFTAPNGKV FHAGPSKRMH WIDVAGEGEI SDSLLRGNDN
DAMNGNAVMF DIGKIFTVGG APNYEYGDNE GTKLAHVIDI NAGEGSETVQ RVGDMAFART
LANSVGLPSG EVIVIGGQTK VFLFTDREAV FAAEIWSPNT GQFTTLAEMK IPRTYHSVAI
LMKDGRVWAA GGGLCGNCPT NHKDAEILTP PYLLNEDGSL KTRPVIQSSP SRLVPGETIN
VSVDTSGNHN FVLMRISAVT HSVNNDQRRI PLTTVGGDNN SFQLIAPDNY NVTVPGTYFL
FAMNADGVPS VGKTIVVDAP DGPQPDPPLI FPIESADFSG LDRWVKEQTS YNNLVTTFPI
SYGPLRDLGV ISNSRLHIPA SV
//
