ID B7L0X4_METC4 Unreviewed; 805 AA.
AC B7L0X4;
DT 10-FEB-2009, integrated into UniProtKB/TrEMBL.
DT 10-FEB-2009, sequence version 1.
DT 24-JAN-2024, entry version 73.
DE SubName: Full=Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) {ECO:0000313|EMBL:ACK83345.1};
GN OrderedLocusNames=Mchl_2503 {ECO:0000313|EMBL:ACK83345.1};
OS Methylorubrum extorquens (strain CM4 / NCIMB 13688) (Methylobacterium
OS extorquens).
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
OC Methylobacteriaceae; Methylorubrum.
OX NCBI_TaxID=440085 {ECO:0000313|EMBL:ACK83345.1, ECO:0000313|Proteomes:UP000002385};
RN [1] {ECO:0000313|Proteomes:UP000002385}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CM4 / NCIMB 13688 {ECO:0000313|Proteomes:UP000002385};
RG US DOE Joint Genome Institute;
RA Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H.,
RA Bruce D., Goodwin L., Pitluck S., Chertkov O., Brettin T., Detter J.C.,
RA Han C., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N.,
RA Marx C., Richardson P.;
RT "Complete sequence of chromosome of Methylobacterium chloromethanicum
RT CM4.";
RL Submitted (DEC-2008) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:ACK83345.1, ECO:0000313|Proteomes:UP000002385}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CM4 / NCIMB 13688 {ECO:0000313|Proteomes:UP000002385};
RX PubMed=22887658; DOI=10.1128/JB.01009-12;
RA Marx C.J., Bringel F., Chistoserdova L., Moulin L., Farhan Ul Haque M.,
RA Fleischman D.E., Gruffaz C., Jourand P., Knief C., Lee M.C., Muller E.E.,
RA Nadalig T., Peyraud R., Roselli S., Russ L., Goodwin L.A., Ivanova N.,
RA Kyrpides N., Lajus A., Land M.L., Medigue C., Mikhailova N., Nolan M.,
RA Woyke T., Stolyar S., Vorholt J.A., Vuilleumier S.;
RT "Complete genome sequences of six strains of the genus Methylobacterium.";
RL J. Bacteriol. 194:4746-4748(2012).
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DR EMBL; CP001298; ACK83345.1; -; Genomic_DNA.
DR RefSeq; WP_015950905.1; NC_011757.1.
DR AlphaFoldDB; B7L0X4; -.
DR KEGG; mch:Mchl_2503; -.
DR HOGENOM; CLU_000445_83_1_5; -.
DR OMA; RITHMAH; -.
DR Proteomes; UP000002385; Chromosome.
DR CDD; cd01948; EAL; 1.
DR CDD; cd01949; GGDEF; 1.
DR Gene3D; 3.30.70.270; -; 1.
DR Gene3D; 3.20.20.450; EAL domain; 1.
DR Gene3D; 3.30.450.20; PAS domain; 1.
DR InterPro; IPR001633; EAL_dom.
DR InterPro; IPR035919; EAL_sf.
DR InterPro; IPR000160; GGDEF_dom.
DR InterPro; IPR029787; Nucleotide_cyclase.
DR InterPro; IPR000014; PAS.
DR InterPro; IPR035965; PAS-like_dom_sf.
DR InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR NCBIfam; TIGR00254; GGDEF; 1.
DR NCBIfam; TIGR00229; sensory_box; 1.
DR PANTHER; PTHR44757:SF2; CYCLIC DI-GMP PHOSPHODIESTERASE PDER; 1.
DR PANTHER; PTHR44757; DIGUANYLATE CYCLASE DGCP; 1.
DR Pfam; PF00563; EAL; 1.
DR Pfam; PF00990; GGDEF; 1.
DR Pfam; PF13188; PAS_8; 1.
DR SMART; SM00052; EAL; 1.
DR SMART; SM00267; GGDEF; 1.
DR SMART; SM00091; PAS; 1.
DR SUPFAM; SSF141868; EAL domain-like; 1.
DR SUPFAM; SSF55073; Nucleotide cyclase; 1.
DR SUPFAM; SSF55785; PYP-like sensor domain (PAS domain); 1.
DR PROSITE; PS50883; EAL; 1.
DR PROSITE; PS50887; GGDEF; 1.
DR PROSITE; PS50112; PAS; 1.
PE 4: Predicted;
FT DOMAIN 264..310
FT /note="PAS"
FT /evidence="ECO:0000259|PROSITE:PS50112"
FT DOMAIN 410..542
FT /note="GGDEF"
FT /evidence="ECO:0000259|PROSITE:PS50887"
FT DOMAIN 551..801
FT /note="EAL"
FT /evidence="ECO:0000259|PROSITE:PS50883"
SQ SEQUENCE 805 AA; 86419 MW; DCBF673582C6B960 CRC64;
MPIPTSDASA AALVQHWRSC RSRPGATPGY DAVVLGRLGR LADRCALVAT REGRAERILW
GGTGFRDWFE DEIRDRPLVQ MPDEIRRPIE EIGIAALRTG EPAGARCDRI TDGVVTTWNL
VGVPLANGSG TPLLLVHVDS EGVRTELMQA MFGATGQGLM ALGAIREASG AVADFKIVAL
NQGAAEILGR PVASLQWQRL GDLVPVRLGV TQRLSGVLGC ADRATFELAV PRADRTTLHL
KVEAQAIGDL VAVAMTDVGD IKAREASFRF LFESNPLPMW LVDQDSARFV AVNEAAVAHY
GYSREAFLAR GLQDLSEAVA FSFARDGRLH RHRRADGSLI DVTLFERSLA FEGRPAVLGA
AIDVTEQRRA EARITHMAHH DALTGLPNRA LFTTCLAEVI AEHARTGAGA GAALLCLDLD
KFKLVNDTLG HPAGDTLLRA VADRITACLH GEDLVARLGG DEFAVLLRTP DAGTVSAVAG
RIIEALSHPV RLGDRECQIG VSVGIACLPE HGTDSDTLLR HADLALYRAK ADGGSIAHCF
EAAMDSWDRS RRRREADLHE AFARGDLALA YQPVVGVRSR AIVGFEALLR WHHPVEGAIP
PSEFVPLAEE TGLIVPIGAW VLRQACAEAS LWADPVRIAV NLSPVQFRDP GLVATVREAL
ALSGLAPHRL ELEVTESVLL AASEANVATL HALRDLGVRI AMDDFGTGYC SLSYLQKFPF
DKIKIDRSFV SRLGEDPHST AIVQAVIGLG ASLGIVTVAE GVETEVQFAH LRAEGCEEVQ
GYLFGRPIPA PQAVGPIRRE ADVAA
//