ID B7UU27_VIBAL Unreviewed; 271 AA.
AC B7UU27;
DT 10-FEB-2009, integrated into UniProtKB/TrEMBL.
DT 10-FEB-2009, sequence version 1.
DT 03-MAY-2023, entry version 37.
DE SubName: Full=RNA polymerase sigma factor {ECO:0000313|EMBL:CAR48124.1};
DE Flags: Fragment;
GN Name=rpoD {ECO:0000313|EMBL:CAR48124.1};
OS Vibrio alginolyticus.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Vibrionales; Vibrionaceae;
OC Vibrio.
OX NCBI_TaxID=663 {ECO:0000313|EMBL:CAR48124.1};
RN [1] {ECO:0000313|EMBL:CAR48124.1}
RP NUCLEOTIDE SEQUENCE.
RA Pascual J., Macian M.C., Arahal D.R., Garay E., Pujalte M.J.;
RT "Multilocus sequence analysis of the central clade of the genus Vibrio by
RT using the 16S rRNA, recA, pyrH, rpoD, gyrB, rctB and toxR genes.";
RL Int. J. Syst. Evol. Microbiol. 60:154-165(2010).
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DR EMBL; FM202535; CAR48124.1; -; Genomic_DNA.
DR EMBL; FM202536; CAR48125.1; -; Genomic_DNA.
DR EMBL; FM202537; CAR48126.1; -; Genomic_DNA.
DR EMBL; FM202538; CAR48127.1; -; Genomic_DNA.
DR AlphaFoldDB; B7UU27; -.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0016987; F:sigma factor activity; IEA:InterPro.
DR GO; GO:0006352; P:DNA-templated transcription initiation; IEA:InterPro.
DR Gene3D; 1.10.601.10; RNA Polymerase Primary Sigma Factor; 1.
DR InterPro; IPR007631; RNA_pol_sigma_70_non-ess.
DR InterPro; IPR013325; RNA_pol_sigma_r2.
DR Pfam; PF04546; Sigma70_ner; 1.
DR SUPFAM; SSF88946; Sigma2 domain of RNA polymerase sigma factors; 1.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils}.
FT DOMAIN 28..244
FT /note="RNA polymerase sigma factor 70 non-essential"
FT /evidence="ECO:0000259|Pfam:PF04546"
FT REGION 59..109
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 226..271
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 79..108
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:CAR48124.1"
FT NON_TER 271
FT /evidence="ECO:0000313|EMBL:CAR48124.1"
SQ SEQUENCE 271 AA; 30919 MW; E1C20413675F9C6A CRC64;
LLTREGEIDI AKRIEEGINQ VQSSVAEYPG TIPYILEQFD KVQAEELRLT DLISGFVDPD
ADDTAAPTAT HIGSELTESQ LEEEDDEDVD DDEDSDDDSD DSEEDVGIDP ELALEKFNQL
RSTYQNLQLA INEYGYNSPK ATVANEMMLD VFREFRLTPK QFDHLVNELR TAMDRVRTQE
RLIMKSVVEY GKMPKKSFIA LFTGNESSEA WLDEVLASDK PYAEKIKRNE EEIRRSIAKL
KMIEEETSLN VQNIKDISRR MSIGEAKARR A
//