ID B7ZFK5_9VIRU Unreviewed; 239 AA.
AC B7ZFK5;
DT 03-MAR-2009, integrated into UniProtKB/TrEMBL.
DT 03-MAR-2009, sequence version 1.
DT 24-JAN-2024, entry version 24.
DE RecName: Full=Capsid protein {ECO:0000256|ARBA:ARBA00018091};
GN Name=CP {ECO:0000313|EMBL:CAP62434.1};
OS Rice yellow mottle virus.
OC Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes;
OC Sobelivirales; Solemoviridae; Sobemovirus.
OX NCBI_TaxID=31744 {ECO:0000313|EMBL:CAP62434.1};
RN [1] {ECO:0000313|EMBL:CAP62434.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=Mg21 {ECO:0000313|EMBL:CAP62434.1}, Mg23
RC {ECO:0000313|EMBL:CAP62436.1}, Mg24 {ECO:0000313|EMBL:CAP62437.1},
RC Mg32 {ECO:0000313|EMBL:CAP62445.1}, and Mg33
RC {ECO:0000313|EMBL:CAP62446.1};
RA Fargette D.;
RT "Rice yellow mottle virus, an RNA plant virus, evolves as rapidly as most
RT RNA animal viruses.";
RL Submitted (JAN-2008) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:AIT11593.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=Ug148 {ECO:0000313|EMBL:AIT11593.1};
RX PubMed=25245592;
RA Ochola D., Issaka S., Rakotomalala M., Pinel-Galzi A., Ndikumana I.,
RA Hubert J., Hebrard E., Sere Y., Tusiime G., Fargette D.;
RT "Emergence of rice yellow mottle virus in eastern Uganda: Recent and
RT singular interplay between strains in East Africa and in Madagascar.";
RL Virus Res. 0:0-0(2014).
CC -!- SIMILARITY: Belongs to the icosahedral plant coat protein family.
CC {ECO:0000256|ARBA:ARBA00007446}.
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DR EMBL; KM487711; AIT11593.1; -; Genomic_RNA.
DR EMBL; AM931200; CAP62434.1; -; Genomic_RNA.
DR EMBL; AM931202; CAP62436.1; -; Genomic_RNA.
DR EMBL; AM931203; CAP62437.1; -; Genomic_RNA.
DR EMBL; AM931211; CAP62445.1; -; Genomic_RNA.
DR EMBL; AM931212; CAP62446.1; -; Genomic_RNA.
DR GO; GO:0039617; C:T=3 icosahedral viral capsid; IEA:UniProtKB-KW.
DR GO; GO:0005198; F:structural molecule activity; IEA:InterPro.
DR Gene3D; 2.60.120.20; -; 1.
DR InterPro; IPR000937; Capsid_prot_S-dom_vir.
DR InterPro; IPR029053; Viral_coat.
DR Pfam; PF00729; Viral_coat; 1.
DR SUPFAM; SSF88633; Positive stranded ssRNA viruses; 1.
DR PROSITE; PS00555; ICOSAH_VIR_COAT_S; 1.
PE 3: Inferred from homology;
KW Capsid protein {ECO:0000313|EMBL:CAP62434.1};
KW Virion {ECO:0000313|EMBL:CAP62434.1}.
FT DOMAIN 35..208
FT /note="Icosahedral viral capsid protein S"
FT /evidence="ECO:0000259|Pfam:PF00729"
FT REGION 1..48
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 239 AA; 25977 MW; 1640B9EC52A89AD8 CRC64;
MARKGKKINS NQGQQGKKKS RRPRGRSAEP QLQRAPVAQA SRISGTVPGP LSSNTWPVHS
VEFLMDFKRS ATSADAVAFN CVPFNLPRVW SLARCYSLWK PTRWDVVYLP EVSAATAGSI
EMCYLYDYAD AIPSDTGKMS RTAGFVTSSV WYGAEGCHLL NGGSARNAVV ASMDCSRVGW
RRVTSSIPSS VDPNVVNTIL PARLAVRSSI KPTVDDVPGK LYAIVSMVLR DPVDPTLNT
//