ID B7ZFN9_9VIRU Unreviewed; 239 AA.
AC B7ZFN9;
DT 03-MAR-2009, integrated into UniProtKB/TrEMBL.
DT 03-MAR-2009, sequence version 1.
DT 24-JAN-2024, entry version 26.
DE RecName: Full=Capsid protein {ECO:0000256|ARBA:ARBA00018091};
GN Name=CP {ECO:0000313|EMBL:CAP62468.1};
GN Synonyms=ORF4 {ECO:0000313|EMBL:CBA11941.1};
OS Rice yellow mottle virus.
OC Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes;
OC Sobelivirales; Solemoviridae; Sobemovirus.
OX NCBI_TaxID=31744 {ECO:0000313|EMBL:CAP62468.1};
RN [1] {ECO:0000313|EMBL:CAP62468.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=Tz216 {ECO:0000313|EMBL:CAP62468.1}, and Tz222
RC {ECO:0000313|EMBL:CAP62474.1};
RA Fargette D.;
RT "Rice yellow mottle virus, an RNA plant virus, evolves as rapidly as most
RT RNA animal viruses.";
RL Submitted (JAN-2008) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:CBA11941.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=Tz1107 {ECO:0000313|EMBL:CBA11941.1};
RA Fargette D.;
RL Submitted (JUL-2009) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EMBL:CBA11941.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=Tz1107 {ECO:0000313|EMBL:CBA11941.1};
RA Pinel-Galzi A., Mpunami A., Sangu E., Rakotomalala M.;
RT "Recombination, selection and clock-like evolution of Rice yellow mottle
RT virus.";
RL Submitted (JUL-2010) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the icosahedral plant coat protein family.
CC {ECO:0000256|ARBA:ARBA00007446}.
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DR EMBL; AM931234; CAP62468.1; -; Genomic_RNA.
DR EMBL; AM931240; CAP62474.1; -; Genomic_RNA.
DR EMBL; FN432901; CBA11941.1; -; Genomic_RNA.
DR GO; GO:0039617; C:T=3 icosahedral viral capsid; IEA:UniProtKB-KW.
DR GO; GO:0005198; F:structural molecule activity; IEA:InterPro.
DR Gene3D; 2.60.120.20; -; 1.
DR InterPro; IPR000937; Capsid_prot_S-dom_vir.
DR InterPro; IPR029053; Viral_coat.
DR Pfam; PF00729; Viral_coat; 1.
DR SUPFAM; SSF88633; Positive stranded ssRNA viruses; 1.
DR PROSITE; PS00555; ICOSAH_VIR_COAT_S; 1.
PE 3: Inferred from homology;
KW Capsid protein {ECO:0000313|EMBL:CAP62468.1};
KW Virion {ECO:0000313|EMBL:CAP62468.1}.
FT DOMAIN 34..233
FT /note="Icosahedral viral capsid protein S"
FT /evidence="ECO:0000259|Pfam:PF00729"
FT REGION 1..34
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..17
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 239 AA; 26130 MW; 38310FA0A72EBCE5 CRC64;
MARKGKKTNS NQNQQGKKSR RPRGRSAEPR LQRAPVAQAS RISGMVPGPL SSNVWPVNRS
VEFLMDFKRS ATSVDATIFN CVPFNLPRVW SLARCYSLWK PTRWDVVYLP EVSAATAGSI
EMCYLYDYAD TVPSDTGKMS RTAGFVTSSV WYGAEGCHLL TGGSARNAVV ASMDCSRVDW
KRVTSSIPSG VDPNVVNTIL PARLAVRSSI KPAVDDTPGK LYAIVSMVLR DPVDPTLNT
//