ID B8BBM7_ORYSI Unreviewed; 689 AA.
AC B8BBM7;
DT 03-MAR-2009, integrated into UniProtKB/TrEMBL.
DT 03-MAR-2009, sequence version 1.
DT 27-MAR-2024, entry version 76.
DE RecName: Full=BED-type domain-containing protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=OsI_28158 {ECO:0000313|EMBL:EEC83053.1};
OS Oryza sativa subsp. indica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39946 {ECO:0000313|EMBL:EEC83053.1, ECO:0000313|Proteomes:UP000007015};
RN [1] {ECO:0000313|EMBL:EEC83053.1, ECO:0000313|Proteomes:UP000007015}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. 93-11 {ECO:0000313|Proteomes:UP000007015};
RX PubMed=15685292; DOI=10.1371/journal.pbio.0030038;
RA Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S.,
RA Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.,
RA Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J.,
RA Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X.,
RA Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y.,
RA Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L.,
RA Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H.,
RA Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z.,
RA Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L.,
RA Fang L., Lei T., Chen C., Chen H., Xu Z., Li H., Huang H., Zhang F., Xu H.,
RA Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q., Li W.,
RA Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J., Gao L.,
RA Zheng W., Hao B., Liu S., Wang W., Yuan L., Cao M., McDermott J.,
RA Samudrala R., Wang J., Wong G.K., Yang H.;
RT "The genomes of Oryza sativa: a history of duplications.";
RL PLoS Biol. 3:266-281(2005).
CC -!- SUBUNIT: Homodimer. {ECO:0000256|ARBA:ARBA00011738}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
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DR EMBL; CM000133; EEC83053.1; -; Genomic_DNA.
DR AlphaFoldDB; B8BBM7; -.
DR EnsemblPlants; BGIOSGA027492-TA; BGIOSGA027492-PA; BGIOSGA027492.
DR Gramene; BGIOSGA027492-TA; BGIOSGA027492-PA; BGIOSGA027492.
DR HOGENOM; CLU_009123_1_3_1; -.
DR OMA; QSAECKH; -.
DR Proteomes; UP000007015; Chromosome 8.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0046983; F:protein dimerization activity; IEA:InterPro.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR GO; GO:0009791; P:post-embryonic development; IEA:UniProt.
DR GO; GO:0050896; P:response to stimulus; IEA:UniProt.
DR Gene3D; 2.20.25.80; WRKY domain; 1.
DR InterPro; IPR045259; DAYSLEEPER-like.
DR InterPro; IPR025525; hAT-like_transposase_RNase-H.
DR InterPro; IPR008906; HATC_C_dom.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR003657; WRKY_dom.
DR InterPro; IPR036576; WRKY_dom_sf.
DR InterPro; IPR003656; Znf_BED.
DR InterPro; IPR036236; Znf_C2H2_sf.
DR PANTHER; PTHR23272; BED FINGER-RELATED; 1.
DR PANTHER; PTHR23272:SF123; HAT FAMILY DIMERISATION DOMAIN CONTAINING PROTEIN, EXPRESSED; 1.
DR Pfam; PF05699; Dimer_Tnp_hAT; 1.
DR Pfam; PF14372; hAT-like_RNase-H; 1.
DR Pfam; PF03106; WRKY; 1.
DR SMART; SM00774; WRKY; 1.
DR SMART; SM00614; ZnF_BED; 1.
DR SUPFAM; SSF57667; beta-beta-alpha zinc fingers; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR SUPFAM; SSF118290; WRKY DNA-binding domain; 1.
DR PROSITE; PS50811; WRKY; 1.
DR PROSITE; PS50808; ZF_BED; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000007015};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00027}.
FT DOMAIN 63..120
FT /note="WRKY"
FT /evidence="ECO:0000259|PROSITE:PS50811"
FT DOMAIN 238..293
FT /note="BED-type"
FT /evidence="ECO:0000259|PROSITE:PS50808"
FT REGION 1..22
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 151..197
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 164..183
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 689 AA; 78530 MW; E7ACF34A474C49D0 CRC64;
MENNQSGQAQ DGMADQRFRS WLTEQLNAQP HAGSSSNLEV MQMQVLPSHT NFQSIDTHPH
EYDGYNWRMC GQKVVQGGCH QKFYYECSQA NCGAEKSVTR SADGQIKKTV CKGSHNHPRS
SDRWFRGDGS ATLDAIPVGE ILQAAGVIRP SVAMPRNEEE DELQSGSTDS EEDELQSGWS
DSEEDDASEA RAAGDANAIR HDPAAAAQET TAENTTQVDV LGNGCQQHTN YHRSEKGRSN
SKVWEDFTAV SSGGKLQSAE CEHCKICLSG KTSEGTNHLH KHLKTCPAQC RTTRLQQKVH
FIDNEWKMNR KIISYGYGRY PDGADYYVGI LTYWKSCLDI REDPSSLIKE AVQDWNLEHK
LLGLAWQKYF PDKVALDLEE YMAGEVHNYL LAKYKLLTVP CMIDALHDLF GYDLGNIVKE
LSKQWFGYMT CSALRLEKYK EILSRMHLSK PSLGSKGWYL TFYLFEAALQ FNKAFPYPEE
MDLKMDIRKP SPQRLEATKN FCDLVRPIYH AIDLLSKQYV TSNSHFHALW RVGIALGESS
RKPNIKCIIN VDDMKKKYDK LWRKCYVWLS LAVFLDPRFK LRYLDHCFTQ AFLSGAKMCI
LEIRMTLGQG AHGEFRELTS YIEGELYPQN DQFDILKWWK DNALMYPTLA KLARDILAIP
GSPVSAESAF DRIDERRQVM KIVEAEIVL
//
