ID B8C1G3_THAPS Unreviewed; 392 AA.
AC B8C1G3;
DT 03-MAR-2009, integrated into UniProtKB/TrEMBL.
DT 03-MAR-2009, sequence version 1.
DT 24-JAN-2024, entry version 60.
DE RecName: Full=GH18 domain-containing protein {ECO:0000259|Pfam:PF00704};
GN ORFNames=THAPSDRAFT_4290 {ECO:0000313|EMBL:EED92771.1};
OS Thalassiosira pseudonana (Marine diatom) (Cyclotella nana).
OC Eukaryota; Sar; Stramenopiles; Ochrophyta; Bacillariophyta;
OC Coscinodiscophyceae; Thalassiosirophycidae; Thalassiosirales;
OC Thalassiosiraceae; Thalassiosira.
OX NCBI_TaxID=35128 {ECO:0000313|EMBL:EED92771.1, ECO:0000313|Proteomes:UP000001449};
RN [1] {ECO:0000313|EMBL:EED92771.1, ECO:0000313|Proteomes:UP000001449}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CCMP1335 {ECO:0000313|EMBL:EED92771.1};
RX PubMed=15459382; DOI=10.1126/science.1101156;
RA Armbrust E.V., Berges J.A., Bowler C., Green B.R., Martinez D.,
RA Putnam N.H., Zhou S., Allen A.E., Apt K.E., Bechner M., Brzezinski M.A.,
RA Chaal B.K., Chiovitti A., Davis A.K., Demarest M.S., Detter J.C.,
RA Glavina T., Goodstein D., Hadi M.Z., Hellsten U., Hildebrand M.,
RA Jenkins B.D., Jurka J., Kapitonov V.V., Kroger N., Lau W.W., Lane T.W.,
RA Larimer F.W., Lippmeier J.C., Lucas S., Medina M., Montsant A., Obornik M.,
RA Parker M.S., Palenik B., Pazour G.J., Richardson P.M., Rynearson T.A.,
RA Saito M.A., Schwartz D.C., Thamatrakoln K., Valentin K., Vardi A.,
RA Wilkerson F.P., Rokhsar D.S.;
RT "The genome of the diatom Thalassiosira pseudonana: ecology, evolution, and
RT metabolism.";
RL Science 306:79-86(2004).
RN [2] {ECO:0000313|EMBL:EED92771.1, ECO:0000313|Proteomes:UP000001449}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CCMP1335 {ECO:0000313|EMBL:EED92771.1};
RX PubMed=18923393; DOI=10.1038/nature07410;
RA Bowler C., Allen A.E., Badger J.H., Grimwood J., Jabbari K., Kuo A.,
RA Maheswari U., Martens C., Maumus F., Otillar R.P., Rayko E., Salamov A.,
RA Vandepoele K., Beszteri B., Gruber A., Heijde M., Katinka M., Mock T.,
RA Valentin K., Verret F., Berges J.A., Brownlee C., Cadoret J.P.,
RA Chiovitti A., Choi C.J., Coesel S., De Martino A., Detter J.C., Durkin C.,
RA Falciatore A., Fournet J., Haruta M., Huysman M.J., Jenkins B.D.,
RA Jiroutova K., Jorgensen R.E., Joubert Y., Kaplan A., Kroger N., Kroth P.G.,
RA La Roche J., Lindquist E., Lommer M., Martin-Jezequel V., Lopez P.J.,
RA Lucas S., Mangogna M., McGinnis K., Medlin L.K., Montsant A.,
RA Oudot-Le Secq M.P., Napoli C., Obornik M., Parker M.S., Petit J.L.,
RA Porcel B.M., Poulsen N., Robison M., Rychlewski L., Rynearson T.A.,
RA Schmutz J., Shapiro H., Siaut M., Stanley M., Sussman M.R., Taylor A.R.,
RA Vardi A., von Dassow P., Vyverman W., Willis A., Wyrwicz L.S.,
RA Rokhsar D.S., Weissenbach J., Armbrust E.V., Green B.R., Van de Peer Y.,
RA Grigoriev I.V.;
RT "The Phaeodactylum genome reveals the evolutionary history of diatom
RT genomes.";
RL Nature 456:239-244(2008).
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DR EMBL; CM000641; EED92771.1; -; Genomic_DNA.
DR RefSeq; XP_002289234.1; XM_002289198.1.
DR AlphaFoldDB; B8C1G3; -.
DR PaxDb; 35128-Thaps4290; -.
DR EnsemblProtists; EED92771; EED92771; THAPSDRAFT_4290.
DR GeneID; 7447493; -.
DR KEGG; tps:THAPSDRAFT_4290; -.
DR eggNOG; ENOG502S306; Eukaryota.
DR HOGENOM; CLU_643186_0_0_1; -.
DR InParanoid; B8C1G3; -.
DR Proteomes; UP000001449; Chromosome 4.
DR GO; GO:0005975; P:carbohydrate metabolic process; IEA:InterPro.
DR Gene3D; 3.20.20.80; Glycosidases; 1.
DR InterPro; IPR001223; Glyco_hydro18_cat.
DR InterPro; IPR017853; Glycoside_hydrolase_SF.
DR Pfam; PF00704; Glyco_hydro_18; 1.
DR SUPFAM; SSF51445; (Trans)glycosidases; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000001449}.
FT DOMAIN 28..194
FT /note="GH18"
FT /evidence="ECO:0000259|Pfam:PF00704"
SQ SEQUENCE 392 AA; 43711 MW; 293AC83B92B1750A CRC64;
MSSTDTWKSQ QRLLPSEFSN KHHPPLIIGY AHDCKSGKSE QAIKDGARVI IWSFLHLDTT
ASKVDERYQI GSIRSDLDVS AIRKLRDKYQ HVLHLAAFGG WNGPHPPIVK TGTNDSFSSL
TGKEWCDVFM EYNKSLGYLF DGIDWDYEGH DDLNSPTAKF TLATLDIMAD FSVQAKQKYG
MIVSMAPAES YLDASADPDS IDVSFSLDLD LPPRAFTSSQ HATNENRELI KSVNFSHAGR
QCYAYVIAKA GIDTFDWISI QLYEAYSPFL HDVSTRRLDP VGALMIRVNG LVNGYKVTGL
PLPSDEYNVK IPPSRLVIGI ANGWADGMKF CKVTSSSLKA AYETTSLKHG ENYLGVMFWT
IEEEGKDEDS RLAYSLARAF KMNNSELAGD EL
//
