ID B8C2I9_THAPS Unreviewed; 1356 AA.
AC B8C2I9;
DT 03-MAR-2009, integrated into UniProtKB/TrEMBL.
DT 03-MAR-2009, sequence version 1.
DT 24-JAN-2024, entry version 60.
DE RecName: Full=Mediator complex subunit 15 KIX domain-containing protein {ECO:0000259|Pfam:PF16987};
GN ORFNames=THAPSDRAFT_22676 {ECO:0000313|EMBL:EED92393.1};
OS Thalassiosira pseudonana (Marine diatom) (Cyclotella nana).
OC Eukaryota; Sar; Stramenopiles; Ochrophyta; Bacillariophyta;
OC Coscinodiscophyceae; Thalassiosirophycidae; Thalassiosirales;
OC Thalassiosiraceae; Thalassiosira.
OX NCBI_TaxID=35128 {ECO:0000313|EMBL:EED92393.1, ECO:0000313|Proteomes:UP000001449};
RN [1] {ECO:0000313|EMBL:EED92393.1, ECO:0000313|Proteomes:UP000001449}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CCMP1335 {ECO:0000313|EMBL:EED92393.1};
RX PubMed=15459382; DOI=10.1126/science.1101156;
RA Armbrust E.V., Berges J.A., Bowler C., Green B.R., Martinez D.,
RA Putnam N.H., Zhou S., Allen A.E., Apt K.E., Bechner M., Brzezinski M.A.,
RA Chaal B.K., Chiovitti A., Davis A.K., Demarest M.S., Detter J.C.,
RA Glavina T., Goodstein D., Hadi M.Z., Hellsten U., Hildebrand M.,
RA Jenkins B.D., Jurka J., Kapitonov V.V., Kroger N., Lau W.W., Lane T.W.,
RA Larimer F.W., Lippmeier J.C., Lucas S., Medina M., Montsant A., Obornik M.,
RA Parker M.S., Palenik B., Pazour G.J., Richardson P.M., Rynearson T.A.,
RA Saito M.A., Schwartz D.C., Thamatrakoln K., Valentin K., Vardi A.,
RA Wilkerson F.P., Rokhsar D.S.;
RT "The genome of the diatom Thalassiosira pseudonana: ecology, evolution, and
RT metabolism.";
RL Science 306:79-86(2004).
RN [2] {ECO:0000313|EMBL:EED92393.1, ECO:0000313|Proteomes:UP000001449}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CCMP1335 {ECO:0000313|EMBL:EED92393.1};
RX PubMed=18923393; DOI=10.1038/nature07410;
RA Bowler C., Allen A.E., Badger J.H., Grimwood J., Jabbari K., Kuo A.,
RA Maheswari U., Martens C., Maumus F., Otillar R.P., Rayko E., Salamov A.,
RA Vandepoele K., Beszteri B., Gruber A., Heijde M., Katinka M., Mock T.,
RA Valentin K., Verret F., Berges J.A., Brownlee C., Cadoret J.P.,
RA Chiovitti A., Choi C.J., Coesel S., De Martino A., Detter J.C., Durkin C.,
RA Falciatore A., Fournet J., Haruta M., Huysman M.J., Jenkins B.D.,
RA Jiroutova K., Jorgensen R.E., Joubert Y., Kaplan A., Kroger N., Kroth P.G.,
RA La Roche J., Lindquist E., Lommer M., Martin-Jezequel V., Lopez P.J.,
RA Lucas S., Mangogna M., McGinnis K., Medlin L.K., Montsant A.,
RA Oudot-Le Secq M.P., Napoli C., Obornik M., Parker M.S., Petit J.L.,
RA Porcel B.M., Poulsen N., Robison M., Rychlewski L., Rynearson T.A.,
RA Schmutz J., Shapiro H., Siaut M., Stanley M., Sussman M.R., Taylor A.R.,
RA Vardi A., von Dassow P., Vyverman W., Willis A., Wyrwicz L.S.,
RA Rokhsar D.S., Weissenbach J., Armbrust E.V., Green B.R., Van de Peer Y.,
RA Grigoriev I.V.;
RT "The Phaeodactylum genome reveals the evolutionary history of diatom
RT genomes.";
RL Nature 456:239-244(2008).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
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DR EMBL; CM000642; EED92393.1; -; Genomic_DNA.
DR RefSeq; XP_002290641.1; XM_002290605.1.
DR STRING; 35128.B8C2I9; -.
DR PaxDb; 35128-Thaps22676; -.
DR EnsemblProtists; EED92393; EED92393; THAPSDRAFT_22676.
DR GeneID; 7446446; -.
DR KEGG; tps:THAPSDRAFT_22676; -.
DR eggNOG; ENOG502SJ7A; Eukaryota.
DR HOGENOM; CLU_257365_0_0_1; -.
DR InParanoid; B8C2I9; -.
DR Proteomes; UP000001449; Chromosome 5.
DR GO; GO:0005737; C:cytoplasm; IBA:GO_Central.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003729; F:mRNA binding; IBA:GO_Central.
DR GO; GO:0003712; F:transcription coregulator activity; IEA:InterPro.
DR GO; GO:0006397; P:mRNA processing; IBA:GO_Central.
DR Gene3D; 1.10.246.20; Coactivator CBP, KIX domain; 1.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 2.
DR InterPro; IPR036529; KIX_dom_sf.
DR InterPro; IPR036546; MED15_KIX.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR PANTHER; PTHR47942:SF57; OS02G0119700 PROTEIN; 1.
DR PANTHER; PTHR47942; TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN-RELATED; 1.
DR Pfam; PF16987; KIX_2; 1.
PE 4: Predicted;
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000001449}.
FT DOMAIN 13..88
FT /note="Mediator complex subunit 15 KIX"
FT /evidence="ECO:0000259|Pfam:PF16987"
FT REGION 79..101
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 365..398
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 985..1020
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 378..392
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1356 AA; 151566 MW; D7B242E3327A1327 CRC64;
MSQDAPSLAA STDDWRVSVA QTYRSEEVRS IATVLASLEP GATSASKTML AMRFEESIFK
AASSLDDYKK TIQKRLKKLQ KHYAKQQQEG GAGNAPESES LTREKELLLE NELRETYGQR
LLYIVKHADH AVKVTREKSG EHKANILSQH ANNAKQWAAQ LGLEVADASG KRTLLPLRPE
RKDMAFLTKL KSYLESRVEN IRSHIVKIED PDLFLEEAIL KIDDDLLLKK SFDEVYKKAL
KEADPDAPEF TPEEMKRFLD RINAPVPIPR RGRDGDEVRS AVGRIEKIRA AAQALFTYMG
LTLEDKTSFR GALKRCYTVV KECMRELEGE YNNIVKELDD TDEKGRRIIQ LEDAWNNTLQ
FAEAESEPPA IDGDDGAAGE ESDAKRQKTE EEQSPTPANL PMVIRSRVLL TPGRHTISTL
LPVLKNKKAS LVRNGTATTV RLQFGQAFEM TIYFVPLLVT IRAMKESQGG ASMSSVAGGL
RWPSLHQGLC PSERDISNGK SNNLSVLGVS GSYATLGQIV AKKLEYASSQ ATYVLRRCFA
ETRVGKGALA KSEFEIEILE AGALIKFMQI ARSTYTATTS TIVGRPPHDT LRSINSPSLI
PFPTSDCPSR QFSSFFFGRH DNSTTTYQQP WHNPSFMLEC PPEKVEAWLQ SQLKAAVKAA
NERGVPGDLN NLPIEFDIPV QVDTLAYQRV IEAYARSNTS GASQKAEYWI GRLERHYDAA
VQVYNAKYGV SDDSVASTED TNGIVDGEGT ARTKTSAFAA LVASRKAAPP NATTEQSSTN
MQRVKHAAIV RSVQPTVDCY NAVIEAWAND KDLISVVRSR RWLSKLEDAS KDAPTPLSSS
LQPNARSYDL YLHSCSRGIG KQHKQYRHRA EEAEDILRYR MSPNAPLSIR PTTESFNFVI
RSWTRCRKEL EVAIKVMALV REMEGIQRDA LLKQEKSGRK KKQADDIWRW KLGVVPNTKT
YTMAMDAWII AAGCKASKWS SEQRSLNNTY NQRARGREEK GHGQSTMSPA STSNDDGTDE
MENAESILKY IQTLEEIGRT DVRATVIAYN TLLSGWARLA TTLRPNVPLK AEELLHQMMQ
LSENGDIDAA PDATSFNAVI KAWGNTQRPN SASRCEWWLR KMINEQQINI HGERSSVPPP
NVQTYNLVME AWLKLGDPSR VQDLLLEMDA SSDVAANSES FSKVIRAWLQ EELSNTNQYG
LPGTSLENAF NWLQELMERE KTNKSDLGSS PDLYKAILKT AARTDATSKN ILVVGQAAFW
DMRDSRFGID AQAYEWLLEI GAKVLGPHDT KKRDDFVSSL VQQCCNDGYL SAKFINKLAN
PSHYKPIQES DGVELALLLG EPPYPTSWSR NLVDKR
//