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Database: UniProt
Entry: B8C8P3_THAPS
LinkDB: B8C8P3_THAPS
Original site: B8C8P3_THAPS 
ID   B8C8P3_THAPS            Unreviewed;      1660 AA.
AC   B8C8P3;
DT   03-MAR-2009, integrated into UniProtKB/TrEMBL.
DT   03-MAR-2009, sequence version 1.
DT   24-JAN-2024, entry version 75.
DE   SubName: Full=Uncharacterized protein {ECO:0000313|EMBL:EED90519.1};
GN   ORFNames=THAPSDRAFT_24078 {ECO:0000313|EMBL:EED90519.1};
OS   Thalassiosira pseudonana (Marine diatom) (Cyclotella nana).
OC   Eukaryota; Sar; Stramenopiles; Ochrophyta; Bacillariophyta;
OC   Coscinodiscophyceae; Thalassiosirophycidae; Thalassiosirales;
OC   Thalassiosiraceae; Thalassiosira.
OX   NCBI_TaxID=35128 {ECO:0000313|EMBL:EED90519.1, ECO:0000313|Proteomes:UP000001449};
RN   [1] {ECO:0000313|EMBL:EED90519.1, ECO:0000313|Proteomes:UP000001449}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=CCMP1335 {ECO:0000313|EMBL:EED90519.1};
RX   PubMed=15459382; DOI=10.1126/science.1101156;
RA   Armbrust E.V., Berges J.A., Bowler C., Green B.R., Martinez D.,
RA   Putnam N.H., Zhou S., Allen A.E., Apt K.E., Bechner M., Brzezinski M.A.,
RA   Chaal B.K., Chiovitti A., Davis A.K., Demarest M.S., Detter J.C.,
RA   Glavina T., Goodstein D., Hadi M.Z., Hellsten U., Hildebrand M.,
RA   Jenkins B.D., Jurka J., Kapitonov V.V., Kroger N., Lau W.W., Lane T.W.,
RA   Larimer F.W., Lippmeier J.C., Lucas S., Medina M., Montsant A., Obornik M.,
RA   Parker M.S., Palenik B., Pazour G.J., Richardson P.M., Rynearson T.A.,
RA   Saito M.A., Schwartz D.C., Thamatrakoln K., Valentin K., Vardi A.,
RA   Wilkerson F.P., Rokhsar D.S.;
RT   "The genome of the diatom Thalassiosira pseudonana: ecology, evolution, and
RT   metabolism.";
RL   Science 306:79-86(2004).
RN   [2] {ECO:0000313|EMBL:EED90519.1, ECO:0000313|Proteomes:UP000001449}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=CCMP1335 {ECO:0000313|EMBL:EED90519.1};
RX   PubMed=18923393; DOI=10.1038/nature07410;
RA   Bowler C., Allen A.E., Badger J.H., Grimwood J., Jabbari K., Kuo A.,
RA   Maheswari U., Martens C., Maumus F., Otillar R.P., Rayko E., Salamov A.,
RA   Vandepoele K., Beszteri B., Gruber A., Heijde M., Katinka M., Mock T.,
RA   Valentin K., Verret F., Berges J.A., Brownlee C., Cadoret J.P.,
RA   Chiovitti A., Choi C.J., Coesel S., De Martino A., Detter J.C., Durkin C.,
RA   Falciatore A., Fournet J., Haruta M., Huysman M.J., Jenkins B.D.,
RA   Jiroutova K., Jorgensen R.E., Joubert Y., Kaplan A., Kroger N., Kroth P.G.,
RA   La Roche J., Lindquist E., Lommer M., Martin-Jezequel V., Lopez P.J.,
RA   Lucas S., Mangogna M., McGinnis K., Medlin L.K., Montsant A.,
RA   Oudot-Le Secq M.P., Napoli C., Obornik M., Parker M.S., Petit J.L.,
RA   Porcel B.M., Poulsen N., Robison M., Rychlewski L., Rynearson T.A.,
RA   Schmutz J., Shapiro H., Siaut M., Stanley M., Sussman M.R., Taylor A.R.,
RA   Vardi A., von Dassow P., Vyverman W., Willis A., Wyrwicz L.S.,
RA   Rokhsar D.S., Weissenbach J., Armbrust E.V., Green B.R., Van de Peer Y.,
RA   Grigoriev I.V.;
RT   "The Phaeodactylum genome reveals the evolutionary history of diatom
RT   genomes.";
RL   Nature 456:239-244(2008).
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DR   EMBL; CM000645; EED90519.1; -; Genomic_DNA.
DR   RefSeq; XP_002292544.1; XM_002292508.1.
DR   STRING; 35128.B8C8P3; -.
DR   PaxDb; 35128-Thaps24078; -.
DR   EnsemblProtists; EED90519; EED90519; THAPSDRAFT_24078.
DR   GeneID; 7450998; -.
DR   KEGG; tps:THAPSDRAFT_24078; -.
DR   eggNOG; KOG4299; Eukaryota.
DR   HOGENOM; CLU_242187_0_0_1; -.
DR   InParanoid; B8C8P3; -.
DR   Proteomes; UP000001449; Chromosome 9.
DR   GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR   GO; GO:0003682; F:chromatin binding; IBA:GO_Central.
DR   GO; GO:0003677; F:DNA binding; IBA:GO_Central.
DR   GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR   GO; GO:0006325; P:chromatin organization; IBA:GO_Central.
DR   GO; GO:0006355; P:regulation of DNA-templated transcription; IBA:GO_Central.
DR   CDD; cd15504; PHD_PRHA_like; 1.
DR   Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 2.
DR   InterPro; IPR045876; PRHA-like_PHD-finger.
DR   InterPro; IPR019786; Zinc_finger_PHD-type_CS.
DR   InterPro; IPR011011; Znf_FYVE_PHD.
DR   InterPro; IPR001965; Znf_PHD.
DR   InterPro; IPR019787; Znf_PHD-finger.
DR   InterPro; IPR001876; Znf_RanBP2.
DR   InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR   PANTHER; PTHR12628:SF10; C. ELEGANS HOMEOBOX; 1.
DR   PANTHER; PTHR12628; POLYCOMB-LIKE TRANSCRIPTION FACTOR; 1.
DR   Pfam; PF00628; PHD; 1.
DR   SMART; SM00249; PHD; 2.
DR   SMART; SM00547; ZnF_RBZ; 4.
DR   SUPFAM; SSF57903; FYVE/PHD zinc finger; 2.
DR   PROSITE; PS01359; ZF_PHD_1; 1.
DR   PROSITE; PS50016; ZF_PHD_2; 1.
DR   PROSITE; PS01358; ZF_RANBP2_1; 2.
DR   PROSITE; PS50199; ZF_RANBP2_2; 3.
PE   4: Predicted;
KW   Homeobox {ECO:0000256|ARBA:ARBA00023155};
KW   Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW   Reference proteome {ECO:0000313|Proteomes:UP000001449};
KW   Zinc {ECO:0000256|ARBA:ARBA00022833};
KW   Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW   ProRule:PRU00322}.
FT   DOMAIN          235..265
FT                   /note="RanBP2-type"
FT                   /evidence="ECO:0000259|PROSITE:PS50199"
FT   DOMAIN          658..687
FT                   /note="RanBP2-type"
FT                   /evidence="ECO:0000259|PROSITE:PS50199"
FT   DOMAIN          716..740
FT                   /note="RanBP2-type"
FT                   /evidence="ECO:0000259|PROSITE:PS50199"
FT   DOMAIN          1273..1331
FT                   /note="PHD-type"
FT                   /evidence="ECO:0000259|PROSITE:PS50016"
FT   REGION          1..47
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          99..130
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          217..237
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          261..315
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          337..358
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          479..512
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          547..655
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          750..798
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          915..980
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          1408..1440
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          1460..1623
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        1..29
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        115..130
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        479..500
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        562..576
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        591..614
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        626..640
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        641..655
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        762..796
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        923..938
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        1483..1499
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        1515..1530
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        1547..1570
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        1571..1621
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   1660 AA;  179633 MW;  66F98464EA9D832A CRC64;
     MGNSPSVNNH PQKQGDGNDN DNGPPLQRKL SSSIDRERSG RCPTCGEQTH RVEITTTTSA
     DGEGVGRVVS KVKIPLTIDG MVYRGRCLIC LPLPGGGGGS CGGRGKGPAS ALGEDRRESS
     SSSSVASSSI DRKISSLGSS SLAVASVPAP APVASSSVSM GGLDLLACAS VEDSSERDVA
     SLAPVESKAA ASSAPVASYS AHSRGKKLQK LVAPSSLRSS AAVNDAPAAD ATASTEGEEW
     NCTTCSHVNL PHKKRCGKCQ GWRGGFRENI RNTPRKREGS SQQTPSSTKS DNEESRRSRN
     RVAPQRFVAR PSKQGLGVDQ GDAIVIAAAN RLDAANVSTT DASGGGSGSE KKGAGENNSA
     LVVNSDVTSS SSTGMDTTTN ESNNDAVLLE APVWLDESLL MAGTRVIVSY KGAPFKATVR
     KRRIMKEHHQ VLLHYDGNKK SNVHWVPLDR ITDILYEGME EDEYDEEMVT VYAGIKRTTS
     SGSNGLKRTN STGSGNRYSR RASNDSHRSA ETSVGRLDSF ALSFEHDNNI IDDAANSAVV
     DVGGIMGGVA EPGGKVVSNG VSKRKRSHDS FREEPASKSL KSGSTNKRVF NKNDGSDDEA
     ATRIVKRKSN ISPRPRELRP TSKLLAMQAT IASSSKRSTS VDSKKAAKKH GTKSKAAEEG
     DWKCGKCGNE VLAVKKRCGN CQSWKGGARE NIRKSVTPSK PKRMPYSREN ASHETPVGSW
     HCEKCGVDNL ASKKRCGVCQ GWVGGIRMNI RTKSASPKRK KKASSSSVDI SNDKVKAPKE
     KVEVARQSKS RDAVEEDSDD EVNVDDVACC LCKCAVDFSD DFFFMPENTA SNARSDAITA
     VKCESPPAGF SVPDARAVQS GDGEAGSAVE EVALNGEAKT GNPFIAHASM KTIICNGEGI
     TSNNSEAYVD ESIKADGRKE LQPPTTSDGS SSSLVESSEV ERKPAAKPEV NSEEKSAIGS
     IDEDDESEKS EVPPFQLPRR LYDPGNSLIL CDGPAHATRR KSSGGQYKCN RAYHQLCHFI
     PVFSVPRGAW RCLVCRYRDE KFLEQNNKGR SNEDSLSDEE LTAIFRCVAA KSPEEATSAV
     DANEEPTDQI DIASVEQRFE YMSAPLKAKI LHSELTTRAK SLINTSLSTI RTAEHSIRAF
     TETNKARKAL TERMESSLGL PQELIQCFMR IAQSKMRVRE LIFGVEKAIK NRQLHGNLTS
     AQEGDNGAEW IDIVSELKQW YLTQQPNDTN KTLFHLLFPE KGGLTRRRLE PRTDESKEEA
     ESASNSSGIS LDNLRCVCCF KGTASNENDL LLCDGMGCYR AFHMCCVEPK LTLEDVEDED
     ESWFCPLCTA HATLVHHAQK ESLGDEFHIN PPPEEWEVAT DVFPEAELEV RVAQKLKDGE
     LDDECNDFLT ETLGIVCAFS RQAAQFEYSD AADEEEDDDF QFGGKGSSDD SDSFDGDSDE
     EKQLMCEAIG KDELDALSAC SSANNSDSSG TGKKRQRRSR RKRSSMPGDT SDDEQSKSGD
     IGQLDTSNIL FGKRRTTKVD YRKLNDAMFG DVSDDEATAA TSKFDYKPSA RVQSDSGNNS
     SDSSSKGSED ESGFNNKKGD LKPIVKAPGR TKEAKKKRAR DSGDEKQPAK KKAKTPDEPA
     GETWKCDNCG NNNLAGKKRC SVASCQRWKG GKRMNIRTKK
//
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